Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14440 Brassica napus
A07p32430 Brassica napus
A07p34290 Brassica napus
Aa31LG4G12260 Aethionema arabicum
Actinidia08109 Actinidia chinensis
Ah.02g130410 Amaranthus hybridus
Ah.03g133600 Amaranthus hybridus
Ah.08g218300 Amaranthus hybridus
AL2G26440 Arabidopsis lyrata
Aqoxy3G01353 Aquilegia oxysepala
Aqoxy5G03620 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea
AT1G67740 Arabidopsis thaliana
ATR0824G259 Amborella trichopoda
Atru.chr11.2199 Acer truncatum
AUR62001261 Chenopodium quinoa
AUR62005536 Chenopodium quinoa
AUR62024202 Chenopodium quinoa
BcaB03g15168 Brassica carinata
BcaB03g15371 Brassica carinata
BcaB05g24311 Brassica carinata
BcaC03g14868 Brassica carinata
BcaC08g46043 Brassica carinata
BcaC08g46197 Brassica carinata
BolC2t08472H Brassica oleracea
BolC6t38943H Brassica oleracea
BolC6t39200H Brassica oleracea
BraA02t06507Z Brassica rapa
BraA07t30866Z Brassica rapa
BraA07t31058Z Brassica rapa
C02p23390 Brassica napus
C06p38460 Brassica napus
C06p42290 Brassica napus
CAN.G959.23 Capsicum annuum
CANSAT01G2573 Cannabis sativa
CARHR060320 Cardamine hirsuta
Carub.0002s1417 Capsella rubella
Ca_17796_v3 Cicer arietinum L.
Ca_25121_v3 Cicer arietinum L.
CBR_g38912 Chara braunii
Cc11_g16230 Coffea canephora
CDE06G0408 Ceratophyllum demersum
CDE08G0789 Ceratophyllum demersum
CDE09G1301 Ceratophyllum demersum
Cfa009269 Carpinus fangiana
Ciclev10022422m.g Citrus clementina
Ciclev10032789m.g Citrus clementina
CiPaw.11G070800 Carya illinoinensis
ClCG08G017510 Citrullus lanatus
COL.COLO4_23543 Corchorus olitorius
Cpa.g.sc122.10 Carica papaya
Cre10.g452100 Chlamydomonas reinhardtii
CsaV3_2G025120 Cucumis sativus L.
CsaV3_5G030690 Cucumis sativus L.
CSS0012497 Camellia sinensis var. sinensis
CSS0014809 Camellia sinensis var. sinensis
Dinv11022 Davidia involucrata
Duzib248G1249 Durio zibethinus
Duzib251G0883 Durio zibethinus
Duzib268G0224 Durio zibethinus
ECA246G5237 Erigeron canadensis
EL10As2g23198 Beta vulgaris
Eucgr.B03236 Eucalyptus grandis
FAN07G0129 Fragaria x ananassa
FAN08G1783 Fragaria x ananassa
FAN12G3122 Fragaria x ananassa
FAN17G2166 Fragaria x ananassa
FAN18G0098 Fragaria x ananassa
FAN22G0462 Fragaria x ananassa
FAN22G0861 Fragaria x ananassa
FvH4_4g25080 Fragaria vesca
Glyma.05G172300 Glycine max
Glyma.11G245400 Glycine max
Glyma.18G011800 Glycine max
Gohir.A01G156900 Gossypium hirsutum
Gohir.D01G153400 Gossypium hirsutum
Gorai.002G190000 Gossypium raimondii
HanXRQChr17g0540101 Helianthus annuus
Haze_12303 Corylus avellana
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla
HPP92_017052 Vanilla planifolia
Lalb_Chr07g0185571 Lupinus albus
Lalb_Chr11g0075581 Lupinus albus
Lalb_Chr23g0277771 Lupinus albus
Lj6g0007818 Lotus japonicus
Lj6g0014292 Lotus japonicus
Lsat_1_v5_gn_3_29100 Lactuca sativa
Manes.12G018800 Manihot esculenta
Manes.13G019200 Manihot esculenta
Mapoly0083s0047 Marchantia polymorpha
MBI11_g33737_MAGBIO Magnolia biondii
MCO16G101 Micromonas commoda
MD13G1106700 Malus domestica
MD16G1106800 Malus domestica
Medtr2g046810 Medicago truncatula
Medtr3g086230 Medicago truncatula
Medtr8g089610 Medicago truncatula
MELO3C010708.2 Cucumis melo
MELO3C011911.2 Cucumis melo
Migut.E00226 Erythranthe guttata
MSTRG.13333 Avicennia marina
Nitab4.5_0008037g0010 Nicotiana tabacum
Nn3g16614 Nelumbo nucifera
Nn4g22506 Nelumbo nucifera
Oeu004470.1 Olea europaea
Oeu009692.1 Olea europaea
Oeu059785.1 Olea europaea
Os08g0119800 Oryza sativa ssp. japonica
Peaxi162Scf00128g00628 Petunia axillaris
Peaxi162Scf00797g00002 Petunia axillaris
PGR102G3304 Punica granatum
PGSC0003DMG400007201 Solanum tuberosum
Phvul.001G257100 Phaseolus vulgaris
Phvul.002G253700 Phaseolus vulgaris
Potri.008G181900 Populus trichocarpa
Potri.010G052000 Populus trichocarpa
Pp3c23_21280 Physcomitrium patens
Pp3c24_20010 Physcomitrium patens
Pp3c8_24120 Physcomitrium patens
PRCOL_00004421 Prasinoderma coloniale
Prupe.1G239600 Prunus persica
Prupe.5G159900 Prunus persica
Psat5g094200 Pisum sativum
Psat7g059720 Pisum sativum
PSO017G6717 Papaver somniferum
PSO478G3953 Papaver somniferum
QL03p055962 Quercus lobata
RcHm_v2.0_Chr4g0432261 Rosa chinensis
RcHm_v2.0_Chr7g0191491 Rosa chinensis
Rhsim12G0037700 Rhododendron simsii
Sabra08G0138600 Salix brachista
SalBow8G0177 Salvia bowleyana
Sc04g0001060 Simmondsia chinensis
Sc11g0000800 Simmondsia chinensis
Sed0000703 Sechium edule
Sed0013558 Sechium edule
SEGI_41357 Sequoiadendron giganteum
SGA_v2.0_scaffold87G27112 Striga asiatica
SMO137G0014 Selaginella moellendorffii
Solyc10g077120.3 Solanum lycopersicum
Sopen10g028800 Solanum pennellii
Sp5g22750 Schrenkiella parvula
TAR374G0110 Trochodendron aralioides
TAR622G0384 Trochodendron aralioides
THA.LOC104807755 Tarenaya hassleriana
Thecc.02G268400 Theobroma cacao
Thhalv10019165m.g Eutrema salsugineum
TPR.G35846 Trifolium pratense
TPR.G6278 Trifolium pratense
TWI18G0700 Tripterygium wilfordii
TWI36G1485 Tripterygium wilfordii
TWI75G1071 Tripterygium wilfordii
unitig_52.g17185 Utricularia gibba
unitig_62.g23660 Utricularia gibba
unitig_744.g24296 Utricularia gibba
VMungo0251G3559 Vigna mungo
VMungo1383G1841 Vigna mungo
Zm00001eb173510 Zea mays
Zm00001eb261260 Zea mays

User provided reference genes

Program Settings