Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p07670 Brassica napus
A07p32920 Brassica napus
Aa31LG11G13310 Aethionema arabicum
Aa31LG2G2590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4656 Anthoceros agrestis
Actinidia23142 Actinidia chinensis
Ah.12g052580 Amaranthus hybridus
AL2G22700 Arabidopsis lyrata
AL6G27210 Arabidopsis lyrata
Aqoxy4G00617 Aquilegia oxysepala
Aqoxy7G03515 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EZR5ZL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JF6ZBS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T1UJ1Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VP1N9X Arachis hypogaea
AT1G65650 Arabidopsis thaliana
AT5G16310 Arabidopsis thaliana
ATR0083G042 Amborella trichopoda
ATR0736G018 Amborella trichopoda
Atru.chr2.210 Acer truncatum
AUR62010849 Chenopodium quinoa
AUR62019848 Chenopodium quinoa
BcaB01g04992 Brassica carinata
BcaB03g15325 Brassica carinata
BolC3t13386H Brassica oleracea
BolC6t39007H Brassica oleracea
BraA03t10095Z Brassica rapa
BraA07t30919Z Brassica rapa
C03p08910 Brassica napus
C06p39140 Brassica napus
C09p60750 Brassica napus
CAN.G3.18 Capsicum annuum
CANSAT56G0122 Cannabis sativa
CANSAT78G0802 Cannabis sativa
CARHR057470 Cardamine hirsuta
CARHR197000 Cardamine hirsuta
Carub.0002s1149 Capsella rubella
Carub.0006s1450 Capsella rubella
Ca_09968_v3 Cicer arietinum L.
CBR_g541 Chara braunii
Cc01_g15640 Coffea canephora
CDE01G0780 Ceratophyllum demersum
CDE12G0799 Ceratophyllum demersum
Cfa002332 Carpinus fangiana
Cfa022847 Carpinus fangiana
Cfa022867 Carpinus fangiana
Ciclev10028809m.g Citrus clementina
CiPaw.03G255300 Carya illinoinensis
CiPaw.04G179900 Carya illinoinensis
ClCG08G000050 Citrullus lanatus
COL.COLO4_34256 Corchorus olitorius
Cpa.g.sc108.25 Carica papaya
Cre06.g253300 Chlamydomonas reinhardtii
CsaV3_5G040570 Cucumis sativus L.
CSS0042049 Camellia sinensis var. sinensis
DCAR_018595 Daucus carota
Dinv18268 Davidia involucrata
Dinv23149 Davidia involucrata
Duzib093G1552 Durio zibethinus
Duzib128G1740 Durio zibethinus
ECA210G0003 Erigeron canadensis
ECA247G2996 Erigeron canadensis
EL10Ac5g12923 Beta vulgaris
Eucgr.E04242 Eucalyptus grandis
FAN07G2840 Fragaria x ananassa
FAN12G0170 Fragaria x ananassa
FAN17G2198 Fragaria x ananassa
FAN22G2142 Fragaria x ananassa
FvH4_4g33330 Fragaria vesca
Glyma.10G170500 Glycine max
Glyma.20G219500 Glycine max
Gohir.A02G125600 Gossypium hirsutum
Gohir.D03G073200 Gossypium hirsutum
Gorai.003G086500 Gossypium raimondii
GSVIVG01026410001 Vitis vinifera
HanXRQChr01g0011511 Helianthus annuus
HanXRQChr03g0080701 Helianthus annuus
HanXRQChr08g0231061 Helianthus annuus
HanXRQChr08g0231101 Helianthus annuus
Haze_26507 Corylus avellana
Hma1.2p1_0161F.1_g071930 Hydrangea macrophylla
Hma1.2p1_1631F.1_g294590 Hydrangea macrophylla
HPP92_014787 Vanilla planifolia
Hund11385 Selenicereus undatus
Lalb_Chr02g0149411 Lupinus albus
Lalb_Chr06g0168451 Lupinus albus
Lalb_Chr21g0311401 Lupinus albus
Lj2C1108G7 Lonicera japonica
Lj5g0024357 Lotus japonicus
Lsat_1_v5_gn_9_15540 Lactuca sativa
Manes.15G189000 Manihot esculenta
Mapoly0070s0050 Marchantia polymorpha
MBI05_g42317_MAGBIO Magnolia biondii
MCO05G543 Micromonas commoda
MD09G1273300 Malus domestica
MD11G1242600 Malus domestica
MD11G1242700 Malus domestica
MD13G1018500 Malus domestica
MD16G1016200 Malus domestica
Medtr1g078300 Medicago truncatula
MELO3C033520.2 Cucumis melo
Migut.D00785 Erythranthe guttata
MSTRG.21281 Avicennia marina
Nitab4.5_0000539g0060 Nicotiana tabacum
Nitab4.5_0004383g0010 Nicotiana tabacum
Nn3g18239 Nelumbo nucifera
Nn3g20742 Nelumbo nucifera
Nn4g24171 Nelumbo nucifera
Oeu020448.1 Olea europaea
Oeu023907.2 Olea europaea
Os02g0180100 Oryza sativa ssp. japonica
Os02g0822200 Oryza sativa ssp. japonica
Peaxi162Scf00293g00517 Petunia axillaris
PGR042G1535 Punica granatum
PGSC0003DMG400020283 Solanum tuberosum
Phvul.010G077556 Phaseolus vulgaris
Potri.004G130400 Populus trichocarpa
Potri.017G075200 Populus trichocarpa
Pp3c16_12470 Physcomitrium patens
PRCOL_00006972 Prasinoderma coloniale
Prupe.1G335400 Prunus persica
Psat6g052200 Pisum sativum
PSO063G0875 Papaver somniferum
PSO782G4739 Papaver somniferum
QL01p052787 Quercus lobata
QL01p053899 Quercus lobata
QL11p018425 Quercus lobata
RcHm_v2.0_Chr4g0442561 Rosa chinensis
Rhsim13G0056500 Rhododendron simsii
Sabra17G0066700 Salix brachista
Sc01g0010330 Simmondsia chinensis
Sed0025578 Sechium edule
SEGI_08374 Sequoiadendron giganteum
SEGI_28826 Sequoiadendron giganteum
SGA_v2.0_scaffold158G37472 Striga asiatica
SGA_v2.0_scaffold77G25335 Striga asiatica
SHI08918 Sapria himalayana
SMO117G0230 Selaginella moellendorffii
Solyc09g018730.4 Solanum lycopersicum
Sopen09g012270 Solanum pennellii
Sp5g20610 Schrenkiella parvula
Sp6g27850 Schrenkiella parvula
TAR633G2800 Trochodendron aralioides
TAR636G2629 Trochodendron aralioides
THA.LOC104805672 Tarenaya hassleriana
THA.LOC104820932 Tarenaya hassleriana
THA.LOC104822202 Tarenaya hassleriana
Thecc.05G143300 Theobroma cacao
Thhalv10014049m.g Eutrema salsugineum
Thhalv10018850m.g Eutrema salsugineum
TPR.G14657 Trifolium pratense
TPR.G18870 Trifolium pratense
TWI34G1431 Tripterygium wilfordii
TWI60G0129 Tripterygium wilfordii
unitig_747.g21436 Utricularia gibba
vmacro02855 Vaccinium macrocarpon
VMungo0720G2510 Vigna mungo
Zm00001eb038900 Zea mays
Zm00001eb175830 Zea mays
Zm00001eb259220 Zea mays

User provided reference genes

Program Settings