Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p31480 Brassica napus
Aa31LG11G5470 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.115 Anthoceros agrestis
Actinidia13592 Actinidia chinensis
Actinidia24984 Actinidia chinensis
Actinidia24985 Actinidia chinensis
Ah.16g104730 Amaranthus hybridus
AL6G14250 Arabidopsis lyrata
Aqoxy7G00808 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.95MHTD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IFX0ZR Arachis hypogaea
AT5G04620 Arabidopsis thaliana
ATR0057G043 Amborella trichopoda
Atru.chr1.848 Acer truncatum
AUR62012431 Chenopodium quinoa
AUR62031554 Chenopodium quinoa
BcaC06g32172 Brassica carinata
BolC9t59961H Brassica oleracea
BraA10t45194Z Brassica rapa
C09p72170 Brassica napus
CAN.G330.6 Capsicum annuum
CANSAT56G3190 Cannabis sativa
CARHR208670 Cardamine hirsuta
Carub.0006s0354 Capsella rubella
Ca_14044_v3 Cicer arietinum L.
CBR_g51950 Chara braunii
Cc02_g04480 Coffea canephora
Cc07_g03410 Coffea canephora
Cc10_g00450 Coffea canephora
CDE11G0103 Ceratophyllum demersum
Cfa008176 Carpinus fangiana
Cfa008179 Carpinus fangiana
Cfa008215 Carpinus fangiana
Cfa018704 Carpinus fangiana
Ciclev10004861m.g Citrus clementina
CiPaw.03G093800 Carya illinoinensis
ClCG01G001110 Citrullus lanatus
COL.COLO4_14080 Corchorus olitorius
COL.COLO4_14082 Corchorus olitorius
COL.COLO4_14083 Corchorus olitorius
COL.COLO4_14084 Corchorus olitorius
COL.COLO4_15394 Corchorus olitorius
Cpa.g.sc13.277 Carica papaya
Cpa.g.sc13.280 Carica papaya
Cre08.g373347 Chlamydomonas reinhardtii
Cre17.g733650 Chlamydomonas reinhardtii
Cre17.g733702 Chlamydomonas reinhardtii
Cre23.g754897 Chlamydomonas reinhardtii
CsaV3_5G001240 Cucumis sativus L.
CSS0039072 Camellia sinensis var. sinensis
DCAR_020180 Daucus carota
Dinv16855 Davidia involucrata
Duzib084G1159 Durio zibethinus
Duzib205G1320 Durio zibethinus
ECA232G0243 Erigeron canadensis
EL10Ac2g04175 Beta vulgaris
EL10Ac7g17596 Beta vulgaris
Eucgr.K00176 Eucalyptus grandis
FAN01G3128 Fragaria x ananassa
FAN03G0108 Fragaria x ananassa
FAN06G3057 Fragaria x ananassa
FAN06G3781 Fragaria x ananassa
FAN10G0788 Fragaria x ananassa
FAN10G1665 Fragaria x ananassa
FvH4_7g11000 Fragaria vesca
Glyma.04G130900 Glycine max
Glyma.06G316900 Glycine max
Glyma.13G111300 Glycine max
Gohir.A03G059500 Gossypium hirsutum
Gohir.D03G106400 Gossypium hirsutum
Gohir.D09G064600 Gossypium hirsutum
Gorai.003G112900 Gossypium raimondii
Gorai.009G362800 Gossypium raimondii
Gorai.011G088200 Gossypium raimondii
GSVIVG01017497001 Vitis vinifera
HanXRQChr03g0076081 Helianthus annuus
HanXRQChr15g0485901 Helianthus annuus
Haze_13842 Corylus avellana
HPP92_025562 Vanilla planifolia
Hund25864 Selenicereus undatus
Lalb_Chr15g0079621 Lupinus albus
Lj3g0001820 Lotus japonicus
Lj3g0005902 Lotus japonicus
Lj4g0011722 Lotus japonicus
Lj4g0017120 Lotus japonicus
Lj8A45T71 Lonicera japonica
Lsat_1_v5_gn_5_9361 Lactuca sativa
Manes.06G102500 Manihot esculenta
Mapoly0011s0111 Marchantia polymorpha
MBI04_g09533_MAGBIO Magnolia biondii
MBI04_g21509_MAGBIO Magnolia biondii
MBI04_g34093_MAGBIO Magnolia biondii
MBI04_g34094_MAGBIO Magnolia biondii
MBI08_g36669_MAGBIO Magnolia biondii
MBI08_g36673_MAGBIO Magnolia biondii
MBI08_g40515_MAGBIO Magnolia biondii
MCO13G220 Micromonas commoda
MD15G1302100 Malus domestica
Medtr3g008020 Medicago truncatula
MELO3C005823.2 Cucumis melo
Migut.F00496 Erythranthe guttata
Migut.F00501 Erythranthe guttata
Nitab4.5_0000262g0080 Nicotiana tabacum
Nitab4.5_0000448g0050 Nicotiana tabacum
Nitab4.5_0001267g0080 Nicotiana tabacum
Nitab4.5_0001358g0050 Nicotiana tabacum
Nitab4.5_0001358g0060 Nicotiana tabacum
Nn6g33875 Nelumbo nucifera
Oeu042536.1 Olea europaea
Os01g0736400 Oryza sativa ssp. japonica
Os10g0560900 Oryza sativa ssp. japonica
Peaxi162Scf00271g00832 Petunia axillaris
Peaxi162Scf00304g01360 Petunia axillaris
PGR042G2434 Punica granatum
PGSC0003DMG400021582 Solanum tuberosum
Phvul.005G010500 Phaseolus vulgaris
Potri.001G126700 Populus trichocarpa
Pp3c12_22290 Physcomitrium patens
Prupe.2G274800 Prunus persica
Prupe.5G016200 Prunus persica
Psat0ss1306g0080 Pisum sativum
Psat4g026760 Pisum sativum
Psat4g026800 Pisum sativum
Psat4g224080 Pisum sativum
Psat5g229120 Pisum sativum
Psat6g019240 Pisum sativum
PSO017G3180 Papaver somniferum
PSO170G4268 Papaver somniferum
QL09p019769 Quercus lobata
QL09p019790 Quercus lobata
QL09p019805 Quercus lobata
RcHm_v2.0_Chr1g0348931 Rosa chinensis
RcHm_v2.0_Chr1g0348961 Rosa chinensis
RcHm_v2.0_Chr1g0348971 Rosa chinensis
RcHm_v2.0_Chr1g0348981 Rosa chinensis
RcHm_v2.0_Chr1g0348991 Rosa chinensis
Rhsim03G0164500 Rhododendron simsii
Rhsim03G0164600 Rhododendron simsii
Sabra01G0097700 Salix brachista
Sabra01G0097800 Salix brachista
Sc09g0010310 Simmondsia chinensis
Sed0002724 Sechium edule
SEGI_23386 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01228 Striga asiatica
SMO116G0299 Selaginella moellendorffii
SMO118G0433 Selaginella moellendorffii
Solyc06g034150.4 Solanum lycopersicum
Sopen06g010810 Solanum pennellii
Sp6g38160 Schrenkiella parvula
TAR375G0145 Trochodendron aralioides
Thecc.03G151800 Theobroma cacao
Thecc.03G151900 Theobroma cacao
Thecc.03G152000 Theobroma cacao
Thhalv10013434m.g Eutrema salsugineum
TPR.G12273 Trifolium pratense
TWI77G0110 Tripterygium wilfordii
unitig_748.g7052 Utricularia gibba
vmacro06819 Vaccinium macrocarpon
Zm00001eb391170 Zea mays
Zm00001eb434390 Zea mays

User provided reference genes

Program Settings