Gene: COL.COLO4_14080

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_14080
  • Transcript Identifier COL.rna12866
  • Gene Type Coding gene
  • Location AWUE01015372.1 : 62781-67204 : negative

Gene Family Information

  • ID HOM05D004506
  • #Genes/#Species 160/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna12866
  • GenBank OMO98201.1
  • id gene14052
  • gene_name COLO4_14080
  • uniprot A0A1R3JTX9

Descriptions

  • Description Aminotransferase, class I/classII
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009058
IEA
GOA Databasebiosynthetic process
GO:0009058
IEA
InterProbiosynthetic process
GO:0009102
ISO
PLAZA Integrative Orthologybiotin biosynthetic process AT5G04620
GO:0006665
IEA
GOA Databasesphingolipid metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008710
ISO
PLAZA Integrative Orthology8-amino-7-oxononanoate synthase activity AT5G04620
GO:0030170
IEA
GOA Databasepyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0008483
IEA
GOA Databasetransaminase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004758
IEA
GOA Databaseserine C-palmitoyltransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G04620
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT5G04620
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0005789
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015424 Pyridoxal phosphate-dependent transferase
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR004839 Aminotransferase, class I/classII
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
Mapman id Description
7.6.1 Coenzyme metabolism.biotin biosynthesis.7-keto-8-aminopelargonic acid (KAPA) synthase