Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p30230 Brassica napus
A05p06580 Brassica napus
Aa31LG5G19800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3343 Anthoceros agrestis
Actinidia02160 Actinidia chinensis
Actinidia14399 Actinidia chinensis
Ah.12g054390 Amaranthus hybridus
AL4G37360 Arabidopsis lyrata
Aqoxy7G03746 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0753T9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F6SWGC Arachis hypogaea
AT2G39810 Arabidopsis thaliana
ATR1145G029 Amborella trichopoda
Atru.chr9.1263 Acer truncatum
AUR62007118 Chenopodium quinoa
AUR62019990 Chenopodium quinoa
BcaB01g03573 Brassica carinata
BcaB02g09084 Brassica carinata
BcaB02g09086 Brassica carinata
BcaC01g05462 Brassica carinata
BcaC02g12114 Brassica carinata
BolC3t15027H Brassica oleracea
BolC4t22385H Brassica oleracea
BolC4t22386H Brassica oleracea
BolC4t28262H Brassica oleracea
BraA04t18485Z Brassica rapa
BraA05t19626Z Brassica rapa
C03p26410 Brassica napus
C04p07680 Brassica napus
C04p07690 Brassica napus
C04p67630 Brassica napus
CAN.G1178.8 Capsicum annuum
CAN.G201.38 Capsicum annuum
CAN.G26.29 Capsicum annuum
CANSAT21G1630 Cannabis sativa
CARHR134700 Cardamine hirsuta
Carub.0004s2192 Capsella rubella
Ca_24594_v3 Cicer arietinum L.
CBR_g20363 Chara braunii
Cc08_g12070 Coffea canephora
CDE02G3094 Ceratophyllum demersum
CDE11G0214 Ceratophyllum demersum
Cfa012694 Carpinus fangiana
Ciclev10018712m.g Citrus clementina
CiPaw.11G082400 Carya illinoinensis
CiPaw.12G049700 Carya illinoinensis
ClCG01G004260 Citrullus lanatus
COL.COLO4_37109 Corchorus olitorius
Cpa.g.sc776.3 Carica papaya
Cpa.g.sc776.4 Carica papaya
Cpa.g.sc776.5 Carica papaya
Cre16.g683437 Chlamydomonas reinhardtii
CsaV3_5G004460 Cucumis sativus L.
CSS0007149 Camellia sinensis var. sinensis
CSS0011270 Camellia sinensis var. sinensis
CSS0028018 Camellia sinensis var. sinensis
CSS0032615 Camellia sinensis var. sinensis
CSS0033965 Camellia sinensis var. sinensis
CSS0040587 Camellia sinensis var. sinensis
CSS0048159 Camellia sinensis var. sinensis
DCAR_020177 Daucus carota
DCAR_020178 Daucus carota
Dinv21665 Davidia involucrata
Dinv39174 Davidia involucrata
Duzib068G0690 Durio zibethinus
Duzib205G0832 Durio zibethinus
ECA240G1112 Erigeron canadensis
ECA240G3755 Erigeron canadensis
EL10Ac5g12334 Beta vulgaris
Eucgr.E00402 Eucalyptus grandis
FAN04G2417 Fragaria x ananassa
FAN08G1352 Fragaria x ananassa
FAN13G2915 Fragaria x ananassa
FAN18G4013 Fragaria x ananassa
FvH4_5g19540 Fragaria vesca
Glyma.01G207400 Glycine max
Glyma.11G035800 Glycine max
Gohir.A03G006500 Gossypium hirsutum
Gohir.A12G215200 Gossypium hirsutum
Gohir.D03G165700 Gossypium hirsutum
Gohir.D12G217800 Gossypium hirsutum
Gorai.003G175400 Gossypium raimondii
Gorai.008G233400 Gossypium raimondii
GSVIVG01005813001 Vitis vinifera
GSVIVG01006141001 Vitis vinifera
GSVIVG01006616001 Vitis vinifera
HanXRQChr03g0088961 Helianthus annuus
HanXRQChr13g0417701 Helianthus annuus
HanXRQChr15g0495741 Helianthus annuus
Haze_07939 Corylus avellana
Hma1.2p1_1196F.1_g265990 Hydrangea macrophylla
HPP92_002600 Vanilla planifolia
Hund14524 Selenicereus undatus
Lalb_Chr09g0324311 Lupinus albus
Lalb_Chr16g0379471 Lupinus albus
Lj2C224T11 Lonicera japonica
Lj2g0006235 Lotus japonicus
Lsat_1_v5_gn_4_145741 Lactuca sativa
Lsat_1_v5_gn_6_93441 Lactuca sativa
Manes.01G084200 Manihot esculenta
Mapoly0088s0017 Marchantia polymorpha
MCO16G596 Micromonas commoda
MD04G1060900 Malus domestica
MD06G1054200 Malus domestica
MD06G1054400 Malus domestica
Medtr5g012940 Medicago truncatula
MELO3C005513.2 Cucumis melo
Migut.A01144 Erythranthe guttata
MSTRG.12127 Avicennia marina
Nitab4.5_0001590g0040 Nicotiana tabacum
Nitab4.5_0010602g0010 Nicotiana tabacum
Nn1g00910 Nelumbo nucifera
Oeu027013.1 Olea europaea
Os03g0737200 Oryza sativa ssp. japonica
Peaxi162Scf00346g00112 Petunia axillaris
PGR042G0255 Punica granatum
PGSC0003DMG400026239 Solanum tuberosum
Phvul.002G056400 Phaseolus vulgaris
Potri.001G155200 Populus trichocarpa
Potri.003G079700 Populus trichocarpa
Pp3c10_5410 Physcomitrium patens
Pp3c24_4970 Physcomitrium patens
PRCOL_00000429 Prasinoderma coloniale
Prupe.5G064600 Prunus persica
Psat2g176440 Pisum sativum
Psat4g189680 Pisum sativum
PSO675G3024 Papaver somniferum
PSO732G0005 Papaver somniferum
QL12p011237 Quercus lobata
RcHm_v2.0_Chr7g0204151 Rosa chinensis
Rhsim07G0115200 Rhododendron simsii
Rhsim13G0032200 Rhododendron simsii
Sabra01G0124800 Salix brachista
Sabra03G0049600 Salix brachista
SalBow6G6502 Salvia bowleyana
Sc01g0008260 Simmondsia chinensis
Sed0003847 Sechium edule
Sed0019349 Sechium edule
Sed0022861 Sechium edule
SEGI_38311 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30193 Striga asiatica
SHI29866 Sapria himalayana
SMO356G0217 Selaginella moellendorffii
Solyc08g078320.3 Solanum lycopersicum
Sopen08g026820 Solanum pennellii
Sp4g22100 Schrenkiella parvula
TAR374G0010 Trochodendron aralioides
TAR374G0951 Trochodendron aralioides
THA.LOC104810067 Tarenaya hassleriana
Thecc.03G247200 Theobroma cacao
Thhalv10016197m.g Eutrema salsugineum
TPR.G18132 Trifolium pratense
TWI15G0617 Tripterygium wilfordii
unitig_0.g1052 Utricularia gibba
vmacro14139 Vaccinium macrocarpon
VMungo1215G1578 Vigna mungo
Zm00001eb047720 Zea mays
Zm00001eb056470 Zea mays
Zm00001eb142020 Zea mays
Zm00001eb215300 Zea mays

User provided reference genes

Program Settings