Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p00390 Brassica napus
A09p54850 Brassica napus
Aa31LG10G16820 Aethionema arabicum
Aa31LG1G29390 Aethionema arabicum
Aa31sc35G70 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2306 Anthoceros agrestis
Actinidia00704 Actinidia chinensis
Actinidia24287 Actinidia chinensis
Actinidia28542 Actinidia chinensis
Ah.02g115120 Amaranthus hybridus
AL4G47560 Arabidopsis lyrata
AL5G45780 Arabidopsis lyrata
Aqoxy5G00601 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.16527J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5A22SW Arachis hypogaea
AT2G47970 Arabidopsis thaliana
AT3G63000 Arabidopsis thaliana
ATR0706G070 Amborella trichopoda
Atru.chr5.1296 Acer truncatum
AUR62034023 Chenopodium quinoa
AUR62034024 Chenopodium quinoa
AUR62043003 Chenopodium quinoa
BcaB02g07304 Brassica carinata
BcaB02g08082 Brassica carinata
BcaC02g10333 Brassica carinata
BcaC07g40782 Brassica carinata
BcaC07g42719 Brassica carinata
BcaC07g42722 Brassica carinata
BcaC08g45254 Brassica carinata
BolC4t24555H Brassica oleracea
BolC6t38019H Brassica oleracea
BolC6t38020H Brassica oleracea
BolC8t51354H Brassica oleracea
BraA04t15757Z Brassica rapa
C04p30230 Brassica napus
C06p28510 Brassica napus
C06p28520 Brassica napus
C08p37710 Brassica napus
CAN.G1209.44 Capsicum annuum
CANSAT25G3440 Cannabis sativa
CARHR173290 Cardamine hirsuta
Carub.0005s2965 Capsella rubella
Ca_09104_v3 Cicer arietinum L.
Cc01_g20110 Coffea canephora
CDE01G0135 Ceratophyllum demersum
CDE12G0180 Ceratophyllum demersum
Cfa006054 Carpinus fangiana
Cfa022542 Carpinus fangiana
Ciclev10011862m.g Citrus clementina
CiPaw.07G098600 Carya illinoinensis
ClCG01G000050 Citrullus lanatus
COL.COLO4_08043 Corchorus olitorius
Cpa.g.sc9.150 Carica papaya
CsaV3_5G000130 Cucumis sativus L.
CSS0018382 Camellia sinensis var. sinensis
CSS0029376 Camellia sinensis var. sinensis
CSS0045203 Camellia sinensis var. sinensis
DCAR_012436 Daucus carota
Duzib133G1404 Durio zibethinus
Duzib147G1201 Durio zibethinus
Duzib211G0578 Durio zibethinus
ECA248G1403 Erigeron canadensis
EL10Ac5g11643 Beta vulgaris
Eucgr.K03426 Eucalyptus grandis
FAN15G2832 Fragaria x ananassa
FAN20G1381 Fragaria x ananassa
FAN24G0196 Fragaria x ananassa
FAN27G1423 Fragaria x ananassa
FvH4_2g24580 Fragaria vesca
Glyma.03G207900 Glycine max
Glyma.19G205200 Glycine max
Gohir.A04G054626 Gossypium hirsutum
Gohir.A08G115800 Gossypium hirsutum
Gohir.A11G248600 Gossypium hirsutum
Gohir.A12G007800 Gossypium hirsutum
Gohir.D08G136600 Gossypium hirsutum
Gohir.D12G007200 Gossypium hirsutum
Gorai.004G139800 Gossypium raimondii
Gorai.008G007400 Gossypium raimondii
GSVIVG01011019001 Vitis vinifera
HanXRQChr11g0334841 Helianthus annuus
Haze_04798 Corylus avellana
Hma1.2p1_0209F.1_g089210 Hydrangea macrophylla
HPP92_001332 Vanilla planifolia
HPP92_013687 Vanilla planifolia
HPP92_013688 Vanilla planifolia
Hund18024 Selenicereus undatus
Lalb_Chr20g0111001 Lupinus albus
Lalb_Chr25g0287571 Lupinus albus
Lj1C40T6 Lonicera japonica
Lj1g0004162 Lotus japonicus
Lsat_1_v5_gn_5_189841 Lactuca sativa
Manes.05G069700 Manihot esculenta
Mapoly0023s0134 Marchantia polymorpha
MBI19_g09851_MAGBIO Magnolia biondii
MCO03G089 Micromonas commoda
MD03G1274300 Malus domestica
MD11G1296800 Malus domestica
Medtr7g107480 Medicago truncatula
MELO3C005918.2 Cucumis melo
Migut.F00598 Erythranthe guttata
MSTRG.27268 Avicennia marina
MSTRG.8371 Avicennia marina
Nitab4.5_0002093g0130 Nicotiana tabacum
Nitab4.5_0003831g0010 Nicotiana tabacum
Nn3g21241 Nelumbo nucifera
Oeu022805.1 Olea europaea
Os01g0377700 Oryza sativa ssp. japonica
Peaxi162Scf01039g00225 Petunia axillaris
PGR044G0382 Punica granatum
PGSC0003DMG400024040 Solanum tuberosum
Phvul.001G201100 Phaseolus vulgaris
Potri.002G213600 Populus trichocarpa
Potri.014G135590 Populus trichocarpa
Pp3c4_25410 Physcomitrium patens
PRCOL_00001630 Prasinoderma coloniale
Prupe.8G251000 Prunus persica
Psat3g025480 Pisum sativum
PSO170G1317 Papaver somniferum
PSO384G1012 Papaver somniferum
PSO407G0423 Papaver somniferum
QL12p023667 Quercus lobata
RcHm_v2.0_Chr6g0292401 Rosa chinensis
Rhsim13G0018200 Rhododendron simsii
Sabra02G0149400 Salix brachista
Sabra14G0101900 Salix brachista
SalBow3G0026 Salvia bowleyana
Sc05g0004670 Simmondsia chinensis
Sed0005784 Sechium edule
Sed0015582 Sechium edule
SEGI_03905 Sequoiadendron giganteum
SEGI_06416 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16642 Striga asiatica
SGA_v2.0_scaffold60G20898 Striga asiatica
SHI00898 Sapria himalayana
SHI15482 Sapria himalayana
SHI19086 Sapria himalayana
SMO011G0024 Selaginella moellendorffii
Solyc06g084440.3 Solanum lycopersicum
Sopen06g035830 Solanum pennellii
Sopen08g018880 Solanum pennellii
Sp4g29890 Schrenkiella parvula
Sp5g00520 Schrenkiella parvula
TAR365G0641 Trochodendron aralioides
TAR636G1438 Trochodendron aralioides
THA.LOC104799698 Tarenaya hassleriana
THA.LOC104817536 Tarenaya hassleriana
THA.LOC104820469 Tarenaya hassleriana
Thecc.01G288700 Theobroma cacao
Thhalv10001466m.g Eutrema salsugineum
TPR.G32310 Trifolium pratense
TWI14G1187 Tripterygium wilfordii
TWI23G1267 Tripterygium wilfordii
unitig_37.g12470 Utricularia gibba
vmacro09158 Vaccinium macrocarpon
vmacro09175 Vaccinium macrocarpon
VMungo1383G0326 Vigna mungo
Zm00001eb098320 Zea mays
Zm00001eb146560 Zea mays
Zm00001eb366640 Zea mays

User provided reference genes

Program Settings