Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p10110 Brassica napus
A08p24790 Brassica napus
Actinidia07680 Actinidia chinensis
Actinidia39559 Actinidia chinensis
AL1G43790 Arabidopsis lyrata
Aqoxy1G01779 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2E3FWC Arachis hypogaea
AT1G29950 Arabidopsis thaliana
ATR0782G119 Amborella trichopoda
Atru.chr10.1342 Acer truncatum
BcaB03g12186 Brassica carinata
BcaB03g13850 Brassica carinata
BcaC01g00145 Brassica carinata
BcaC06g35475 Brassica carinata
BolC3t19883H Brassica oleracea
BolC3t19884H Brassica oleracea
BolC7t42047H Brassica oleracea
BolC7t42051H Brassica oleracea
BraA07t28804Z Brassica rapa
BraA08t34433Z Brassica rapa
BraA08t34434Z Brassica rapa
C03p76270 Brassica napus
C07p15610 Brassica napus
C07p15630 Brassica napus
CAN.G257.6 Capsicum annuum
CANSAT35G0919 Cannabis sativa
CARHR029490 Cardamine hirsuta
Carub.0001s2817 Capsella rubella
Carub.0001s2818 Capsella rubella
Ca_18271_v3 Cicer arietinum L.
Cc09_g09510 Coffea canephora
CDE02G0697 Ceratophyllum demersum
CDE08G0998 Ceratophyllum demersum
Cfa000973 Carpinus fangiana
Ciclev10016464m.g Citrus clementina
CiPaw.09G126600 Carya illinoinensis
CiPaw.09G126700 Carya illinoinensis
CiPaw.10G093500 Carya illinoinensis
CiPaw.10G093600 Carya illinoinensis
ClCG01G024410 Citrullus lanatus
COL.COLO4_06070 Corchorus olitorius
CsaV3_6G051550 Cucumis sativus L.
CsaV3_6G051560 Cucumis sativus L.
Dinv05249 Davidia involucrata
Dinv30712 Davidia involucrata
Dinv32278 Davidia involucrata
Dinv33636 Davidia involucrata
Duzib160G0871 Durio zibethinus
Duzib192G0660 Durio zibethinus
Duzib235G1094 Durio zibethinus
ECA236G0629 Erigeron canadensis
EL10Ac8g19752 Beta vulgaris
Eucgr.D00317 Eucalyptus grandis
FAN11G2204 Fragaria x ananassa
FAN16G0098 Fragaria x ananassa
FAN21G2255 Fragaria x ananassa
FAN25G3280 Fragaria x ananassa
FvH4_3g06000 Fragaria vesca
Glyma.05G129400 Glycine max
Glyma.05G129500 Glycine max
Glyma.08G084100 Glycine max
Glyma.08G084200 Glycine max
Gohir.A05G150000 Gossypium hirsutum
Gohir.A05G150100 Gossypium hirsutum
Gohir.A10G039000 Gossypium hirsutum
Gohir.A10G039100 Gossypium hirsutum
Gohir.D05G152600 Gossypium hirsutum
Gohir.D05G152700 Gossypium hirsutum
Gohir.D10G039800 Gossypium hirsutum
Gohir.D10G039900 Gossypium hirsutum
Gorai.009G156700 Gossypium raimondii
Gorai.009G156800 Gossypium raimondii
Gorai.011G042000 Gossypium raimondii
HanXRQChr04g0118301 Helianthus annuus
HanXRQChr12g0382221 Helianthus annuus
Haze_05549 Corylus avellana
Hma1.2p1_0164F.1_g073090 Hydrangea macrophylla
Hund21515 Selenicereus undatus
Lalb_Chr13g0291991 Lupinus albus
Lj1P1184T76 Lonicera japonica
Lj4g0016525 Lotus japonicus
Lsat_1_v5_gn_1_96101 Lactuca sativa
Lsat_1_v5_gn_7_32861 Lactuca sativa
Manes.15G118900 Manihot esculenta
Manes.15G119000 Manihot esculenta
Manes.17G067500 Manihot esculenta
Manes.17G067600 Manihot esculenta
MBI07_g15278_MAGBIO Magnolia biondii
MBI07_g21772_MAGBIO Magnolia biondii
MBI10_g27416_MAGBIO Magnolia biondii
MD05G1288000 Malus domestica
MD05G1288300 Malus domestica
MD05G1288500 Malus domestica
MD05G1288800 Malus domestica
MD05G1288900 Malus domestica
MD10G1264900 Malus domestica
MD10G1265000 Malus domestica
Medtr4g096660 Medicago truncatula
MELO3C007151.2 Cucumis melo
Migut.H01376 Erythranthe guttata
MSTRG.13248 Avicennia marina
MSTRG.14764 Avicennia marina
Nitab4.5_0001040g0150 Nicotiana tabacum
Nitab4.5_0001655g0240 Nicotiana tabacum
Nn3g20651 Nelumbo nucifera
Nn3g20652 Nelumbo nucifera
Nn4g26507 Nelumbo nucifera
Nn4g26508 Nelumbo nucifera
Oeu040960.2 Olea europaea
Oeu052384.1 Olea europaea
Os01g0626900 Oryza sativa ssp. japonica
Os02g0315600 Oryza sativa ssp. japonica
Os03g0591300 Oryza sativa ssp. japonica
Peaxi162Scf00291g00015 Petunia axillaris
PGSC0003DMG400008295 Solanum tuberosum
Phvul.002G194350 Phaseolus vulgaris
Phvul.002G194400 Phaseolus vulgaris
Potri.011G080000 Populus trichocarpa
Potri.011G080100 Populus trichocarpa
Prupe.4G077000 Prunus persica
Prupe.4G077100 Prunus persica
Psat7g090880 Pisum sativum
PSO541G2725 Papaver somniferum
PSO675G1482 Papaver somniferum
QL05p059278 Quercus lobata
QL05p059480 Quercus lobata
RcHm_v2.0_Chr5g0013401 Rosa chinensis
RcHm_v2.0_Chr5g0013411 Rosa chinensis
RhsimUnG0149400 Rhododendron simsii
RhsimUnG0174800 Rhododendron simsii
Sabra11G0068700 Salix brachista
Sabra11G0070800 Salix brachista
SalBow6G4733 Salvia bowleyana
SalBow7G0317 Salvia bowleyana
Sc17g0005060 Simmondsia chinensis
Sed0005922 Sechium edule
Sed0007839 Sechium edule
Sed0010006 Sechium edule
Sed0014650 Sechium edule
SGA_v2.0_scaffold106G30633 Striga asiatica
SMO118G0243 Selaginella moellendorffii
Solyc02g070875.1 Solanum lycopersicum
Solyc02g070880.1 Solanum lycopersicum
Sopen02g019960 Solanum pennellii
Sp1g25800 Schrenkiella parvula
Sp1g25810 Schrenkiella parvula
TAR629G0415 Trochodendron aralioides
THA.LOC104812665 Tarenaya hassleriana
THA.LOC104814285 Tarenaya hassleriana
THA.LOC104820641 Tarenaya hassleriana
Thecc.06G154000 Theobroma cacao
Thecc.06G154100 Theobroma cacao
Thhalv10009888m.g Eutrema salsugineum
TPR.G4895 Trifolium pratense
TWI53G1884 Tripterygium wilfordii
unitig_8.g4884 Utricularia gibba
vmacro10945 Vaccinium macrocarpon
VMungo0251G1661 Vigna mungo
Zm00001eb277350 Zea mays
Zm00001eb278170 Zea mays
Zm00001eb384990 Zea mays

User provided reference genes

Program Settings