Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48170 Brassica napus
A10p06900 Brassica napus
Aa31LG7G10540 Aethionema arabicum
Aa31LG7G10550 Aethionema arabicum
Aa31LG9G12980 Aethionema arabicum
Aa31sc108G100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2784 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.4151 Anthoceros agrestis
Actinidia22636 Actinidia chinensis
Actinidia23285 Actinidia chinensis
AL1G52910 Arabidopsis lyrata
AL8G17930 Arabidopsis lyrata
Aqoxy5G01224 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IXK305 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UAD7VL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VB8FSW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y5ZCTQ Arachis hypogaea
AT1G45233 Arabidopsis thaliana
AT5G42920 Arabidopsis thaliana
ATR1126G044 Amborella trichopoda
Atru.chr13.704 Acer truncatum
AUR62038817 Chenopodium quinoa
AUR62041892 Chenopodium quinoa
BcaB07g33871 Brassica carinata
BcaC02g10792 Brassica carinata
BcaC06g31738 Brassica carinata
BcaC08g42910 Brassica carinata
BolC4t24007H Brassica oleracea
BolC6t35279H Brassica oleracea
BraA06t27686Z Brassica rapa
BraA10t42942Z Brassica rapa
C04p25060 Brassica napus
C06p01470 Brassica napus
CAN.G1030.10 Capsicum annuum
CANSAT11G0118 Cannabis sativa
CANSAT11G1000 Cannabis sativa
CARHR036370 Cardamine hirsuta
CARHR174670 Cardamine hirsuta
CARHR181170 Cardamine hirsuta
Carub.0001s3568 Capsella rubella
Carub.0008s0587 Capsella rubella
Ca_15944_v3 Cicer arietinum L.
CBR_g24409 Chara braunii
Cc10_g04060 Coffea canephora
CDE04G2017 Ceratophyllum demersum
CDE08G0013 Ceratophyllum demersum
Cfa018088 Carpinus fangiana
Cfa027148 Carpinus fangiana
Ciclev10000290m.g Citrus clementina
CiPaw.15G055600 Carya illinoinensis
CiPaw.16G042900 Carya illinoinensis
ClCG05G019920 Citrullus lanatus
COL.COLO4_26520 Corchorus olitorius
Cpa.g.sc49.27 Carica papaya
Cre17.g705550 Chlamydomonas reinhardtii
CsaV3_4G034360 Cucumis sativus L.
CSS0026728 Camellia sinensis var. sinensis
DCAR_019448 Daucus carota
Dinv35952 Davidia involucrata
Dinv35953 Davidia involucrata
Dinv39307 Davidia involucrata
Duzib093G1704 Durio zibethinus
ECA247G0253 Erigeron canadensis
EL10Ac1g01836 Beta vulgaris
Eucgr.F02336 Eucalyptus grandis
FAN15G1326 Fragaria x ananassa
FAN20G1510 Fragaria x ananassa
FAN24G0195 Fragaria x ananassa
FAN27G2914 Fragaria x ananassa
FvH4_2g34320 Fragaria vesca
Glyma.04G039400 Glycine max
Glyma.06G040600 Glycine max
Glyma.14G083300 Glycine max
Glyma.17G241800 Glycine max
Gohir.A05G203100 Gossypium hirsutum
Gohir.D05G206300 Gossypium hirsutum
Gorai.009G212700 Gossypium raimondii
GSVIVG01009484001 Vitis vinifera
HanXRQChr02g0039511 Helianthus annuus
Hma1.2p1_2046F.1_g312410 Hydrangea macrophylla
HPP92_016717 Vanilla planifolia
Hund23866 Selenicereus undatus
Lalb_Chr08g0245391 Lupinus albus
Lalb_Chr11g0062611 Lupinus albus
Lj1g0004160 Lotus japonicus
Lj4A59T44 Lonicera japonica
Lsat_1_v5_gn_1_21181 Lactuca sativa
Manes.18G038000 Manihot esculenta
Mapoly0012s0112 Marchantia polymorpha
MBI06_g02568_MAGBIO Magnolia biondii
MCO13G423 Micromonas commoda
MD08G1099200 Malus domestica
MD08G1099300 Malus domestica
MD08G1099500 Malus domestica
MD15G1081700 Malus domestica
Medtr3g101790 Medicago truncatula
MELO3C016756.2 Cucumis melo
Migut.N02714 Erythranthe guttata
MSTRG.24335 Avicennia marina
MSTRG.25087 Avicennia marina
Nitab4.5_0000287g0200 Nicotiana tabacum
Nitab4.5_0002760g0030 Nicotiana tabacum
Nn3g17073 Nelumbo nucifera
Nn3g18530 Nelumbo nucifera
Nn3g18532 Nelumbo nucifera
Nn5g30286 Nelumbo nucifera
Nn7g37344 Nelumbo nucifera
Oeu023860.1 Olea europaea
Oeu043579.4 Olea europaea
Os02g0767100 Oryza sativa ssp. japonica
Peaxi162Scf00252g00221 Petunia axillaris
PGR031G1897 Punica granatum
PGSC0003DMG400007967 Solanum tuberosum
Phvul.001G022500 Phaseolus vulgaris
Phvul.009G065600 Phaseolus vulgaris
Potri.002G125300 Populus trichocarpa
Potri.014G028100 Populus trichocarpa
Pp3c7_25670 Physcomitrium patens
PRCOL_00004305 Prasinoderma coloniale
Prupe.1G434400 Prunus persica
Psat5g042600 Pisum sativum
PSO170G2588 Papaver somniferum
PSO210G0441 Papaver somniferum
QL02p004676 Quercus lobata
RcHm_v2.0_Chr6g0308041 Rosa chinensis
Rhsim06G0050800 Rhododendron simsii
Sabra14G0019200 Salix brachista
SalBow8G0374 Salvia bowleyana
SalBow8G2832 Salvia bowleyana
SalBow8G3632 Salvia bowleyana
SalBow8G5418 Salvia bowleyana
Sc02g0007190 Simmondsia chinensis
Sc15g0006090 Simmondsia chinensis
Sed0009272 Sechium edule
Sed0026470 Sechium edule
SEGI_02411 Sequoiadendron giganteum
SEGI_14927 Sequoiadendron giganteum
SEGI_30975 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11777 Striga asiatica
SHI08268 Sapria himalayana
SMO356G0003 Selaginella moellendorffii
Solyc04g078830.3 Solanum lycopersicum
Sopen04g032430 Solanum pennellii
Sp1g34090 Schrenkiella parvula
Sp2g07660 Schrenkiella parvula
TAR381G1434 Trochodendron aralioides
TAR625G1031 Trochodendron aralioides
TAR625G1460 Trochodendron aralioides
THA.LOC104812571 Tarenaya hassleriana
THA.LOC104822853 Tarenaya hassleriana
Thecc.08G005800 Theobroma cacao
Thhalv10003147m.g Eutrema salsugineum
Thhalv10011479m.g Eutrema salsugineum
TPR.G24198 Trifolium pratense
TWI36G0852 Tripterygium wilfordii
TWI56G0235 Tripterygium wilfordii
unitig_749.g13678 Utricularia gibba
vmacro21515 Vaccinium macrocarpon
VMungo0647G1811 Vigna mungo
VMungo1309G1308 Vigna mungo
Zm00001eb255990 Zea mays

User provided reference genes

Program Settings