Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25260 Brassica napus
A05p05600 Brassica napus
Aa31LG1G27110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.779 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2206 Anthoceros agrestis
Actinidia09575 Actinidia chinensis
Actinidia31448 Actinidia chinensis
Ah.12g057860 Amaranthus hybridus
AL4G44810 Arabidopsis lyrata
Aqoxy5G03951 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7T3GCC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9F5S9Q Arachis hypogaea
AT2G45640 Arabidopsis thaliana
ATR0661G478 Amborella trichopoda
Atru.chr5.365 Acer truncatum
Atru.chr9.1501 Acer truncatum
Atru.ctg1434.8 Acer truncatum
AUR62004271 Chenopodium quinoa
AUR62010560 Chenopodium quinoa
AUR62017329 Chenopodium quinoa
AUR62033386 Chenopodium quinoa
BcaB02g09022 Brassica carinata
BcaC01g05120 Brassica carinata
BcaC02g12196 Brassica carinata
BcaC09g48983 Brassica carinata
BolC3t15361H Brassica oleracea
BolC4t22280H Brassica oleracea
BraA03t11727Z Brassica rapa
BraA05t19533Z Brassica rapa
C03p30120 Brassica napus
C04p06550 Brassica napus
CAN.G126.10 Capsicum annuum
CAN.G1608.2 Capsicum annuum
CANSAT21G0327 Cannabis sativa
CARHR140860 Cardamine hirsuta
Carub.0004s2829 Capsella rubella
Ca_23785_v3 Cicer arietinum L.
CBR_g4404 Chara braunii
Cc02_g36970 Coffea canephora
CDE04G2772 Ceratophyllum demersum
CDE06G2826 Ceratophyllum demersum
Cfa012070 Carpinus fangiana
Cfa022890 Carpinus fangiana
Ciclev10022649m.g Citrus clementina
CiPaw.01G258300 Carya illinoinensis
CiPaw.12G100900 Carya illinoinensis
ClCG00G000160 Citrullus lanatus
ClCG05G001990 Citrullus lanatus
ClCG10G003410 Citrullus lanatus
COL.COLO4_12656 Corchorus olitorius
COL.COLO4_23799 Corchorus olitorius
Cpa.g.sc18.165 Carica papaya
Cre09.g404400 Chlamydomonas reinhardtii
CsaV3_3G003440 Cucumis sativus L.
CsaV3_3G009410 Cucumis sativus L.
CSS0004475 Camellia sinensis var. sinensis
CSS0011172 Camellia sinensis var. sinensis
DCAR_006889 Daucus carota
DCAR_008576 Daucus carota
Dinv32406 Davidia involucrata
Dinv43738 Davidia involucrata
Duzib133G0135 Durio zibethinus
Duzib138G0705 Durio zibethinus
ECA236G3516 Erigeron canadensis
EL10Ac1g00948 Beta vulgaris
EL10Ac5g12685 Beta vulgaris
Eucgr.E01334 Eucalyptus grandis
FAN01G2781 Fragaria x ananassa
FAN04G1903 Fragaria x ananassa
FAN06G0648 Fragaria x ananassa
FAN06G3102 Fragaria x ananassa
FAN08G0331 Fragaria x ananassa
FAN10G0783 Fragaria x ananassa
FAN10G4017 Fragaria x ananassa
FAN13G0465 Fragaria x ananassa
FAN18G0922 Fragaria x ananassa
FvH4_5g01190 Fragaria vesca
FvH4_7g12660 Fragaria vesca
Glyma.03G019600 Glycine max
Glyma.07G081500 Glycine max
Glyma.20G186451 Glycine max
Gohir.A11G083500 Gossypium hirsutum
Gohir.D11G087600 Gossypium hirsutum
Gorai.007G093600 Gossypium raimondii
GSVIVG01027575001 Vitis vinifera
HanXRQChr04g0122121 Helianthus annuus
HanXRQChr06g0169271 Helianthus annuus
Haze_08988 Corylus avellana
Haze_16715 Corylus avellana
Haze_26096 Corylus avellana
Hma1.2p1_0033F.1_g020790 Hydrangea macrophylla
Hma1.2p1_2548F.1_g324200 Hydrangea macrophylla
HPP92_025880 Vanilla planifolia
Hund14703 Selenicereus undatus
Hund16975 Selenicereus undatus
Lalb_Chr10g0097651 Lupinus albus
Lj3g0004540 Lotus japonicus
Lsat_1_v5_gn_7_59201 Lactuca sativa
Lsat_1_v5_gn_7_6120 Lactuca sativa
Manes.01G263900 Manihot esculenta
Manes.05G042100 Manihot esculenta
Mapoly0086s0082 Marchantia polymorpha
MBI04_g06621_MAGBIO Magnolia biondii
MBI04_g34692_MAGBIO Magnolia biondii
MD00G1131900 Malus domestica
MD02G1197700 Malus domestica
MD04G1070900 Malus domestica
Medtr8g033340 Medicago truncatula
MELO3C006160.2 Cucumis melo
MELO3C014010.2 Cucumis melo
Migut.C00761 Erythranthe guttata
MSTRG.1255 Avicennia marina
MSTRG.25195 Avicennia marina
Nitab4.5_0001127g0160 Nicotiana tabacum
Nitab4.5_0001702g0190 Nicotiana tabacum
Nitab4.5_0004622g0030 Nicotiana tabacum
Nitab4.5_0007346g0070 Nicotiana tabacum
Nn1g01279 Nelumbo nucifera
Oeu058600.1 Olea europaea
Os02g0122000 Oryza sativa ssp. japonica
Peaxi162Scf00988g00110 Petunia axillaris
PGR042G1009 Punica granatum
PGSC0003DMG400013695 Solanum tuberosum
Phvul.010G087700 Phaseolus vulgaris
Potri.002G151500 Populus trichocarpa
Potri.003G119300 Populus trichocarpa
Potri.014G074000 Populus trichocarpa
Pp3c14_24540 Physcomitrium patens
Prupe.2G150900 Prunus persica
Prupe.5G087000 Prunus persica
Psat4g150640 Pisum sativum
PSO478G3285 Papaver somniferum
PSO782G1895 Papaver somniferum
QL08p051220 Quercus lobata
RcHm_v2.0_Chr1g0351651 Rosa chinensis
RcHm_v2.0_Chr7g0199901 Rosa chinensis
Sabra01G0086400 Salix brachista
Sabra03G0083300 Salix brachista
SalBow7G1560 Salvia bowleyana
Sc22g0000410 Simmondsia chinensis
Sed0003115 Sechium edule
Sed0010224 Sechium edule
SEGI_23012 Sequoiadendron giganteum
SHI32178 Sapria himalayana
SMO230G0007 Selaginella moellendorffii
Solyc05g047690.3 Solanum lycopersicum
Sopen05g027940 Solanum pennellii
Sp4g27680 Schrenkiella parvula
TAR374G0190 Trochodendron aralioides
TAR629G1686 Trochodendron aralioides
THA.LOC104802003 Tarenaya hassleriana
Thecc.01G371500 Theobroma cacao
Thhalv10001671m.g Eutrema salsugineum
TPR.G14692 Trifolium pratense
TWI14G0837 Tripterygium wilfordii
TWI23G1180 Tripterygium wilfordii
vmacro13357 Vaccinium macrocarpon
VMungo0331G2039 Vigna mungo
Zm00001eb208420 Zea mays
Zm00001eb230390 Zea mays
Zm00001eb230470 Zea mays

User provided reference genes

Program Settings