Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p11310 Brassica napus
A10p17340 Brassica napus
Aa31LG1G12350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2535 Anthoceros agrestis
Actinidia09505 Actinidia chinensis
Ah.02g113850 Amaranthus hybridus
Ah.02g123630 Amaranthus hybridus
Ah.02g123640 Amaranthus hybridus
Ah.03g139880 Amaranthus hybridus
AL817U10010 Arabidopsis lyrata
AL8G36800 Arabidopsis lyrata
Aqoxy4G03193 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JL7YN4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T6X9B2 Arachis hypogaea
AT5G60190 Arabidopsis thaliana
ATR0069G023 Amborella trichopoda
AUR62002202 Chenopodium quinoa
AUR62003115 Chenopodium quinoa
AUR62008635 Chenopodium quinoa
AUR62015500 Chenopodium quinoa
AUR62025117 Chenopodium quinoa
AUR62032911 Chenopodium quinoa
AUR62037165 Chenopodium quinoa
AUR62037167 Chenopodium quinoa
BcaB01g04643 Brassica carinata
BcaB08g36313 Brassica carinata
BcaC04g19664 Brassica carinata
BolC3t13765H Brassica oleracea
BolC9t58136H Brassica oleracea
BraA03t10444Z Brassica rapa
BraA10t43818Z Brassica rapa
C03p13030 Brassica napus
C09p52680 Brassica napus
CAN.G354.26 Capsicum annuum
CAN.G682.5 Capsicum annuum
CAN.G765.37 Capsicum annuum
CANSAT54G0683 Cannabis sativa
CARHR273870 Cardamine hirsuta
Carub.0008s2094 Capsella rubella
Ca_19237_v3 Cicer arietinum L.
CBR_g4323 Chara braunii
Cc01_g11690 Coffea canephora
CDE04G2448 Ceratophyllum demersum
Cfa011378 Carpinus fangiana
Cfa026731 Carpinus fangiana
Ciclev10029217m.g Citrus clementina
CiPaw.14G077000 Carya illinoinensis
ClCG02G020830 Citrullus lanatus
COL.COLO4_25263 Corchorus olitorius
Cre01.g055050 Chlamydomonas reinhardtii
CsaV3_6G021480 Cucumis sativus L.
CSS0008575 Camellia sinensis var. sinensis
CSS0010329 Camellia sinensis var. sinensis
CSS0013146 Camellia sinensis var. sinensis
CSS0019084 Camellia sinensis var. sinensis
CSS0026652 Camellia sinensis var. sinensis
CSS0032605 Camellia sinensis var. sinensis
CSS0042497 Camellia sinensis var. sinensis
CSS0048170 Camellia sinensis var. sinensis
DCAR_002673 Daucus carota
DCAR_012615 Daucus carota
DCAR_026152 Daucus carota
Dinv10838 Davidia involucrata
Duzib150G0661 Durio zibethinus
Duzib168G1361 Durio zibethinus
ECA233G4215 Erigeron canadensis
EL10Ac5g12984 Beta vulgaris
EL10Ac8g19614 Beta vulgaris
EL10Ac9g22377 Beta vulgaris
EL10Ac9g22643 Beta vulgaris
Eucgr.J00959 Eucalyptus grandis
FAN02G3329 Fragaria x ananassa
FAN05G2706 Fragaria x ananassa
FAN09G1397 Fragaria x ananassa
FAN09G2086 Fragaria x ananassa
FAN11G1819 Fragaria x ananassa
FAN16G3079 Fragaria x ananassa
FAN17G0248 Fragaria x ananassa
FAN21G1733 Fragaria x ananassa
FAN25G0902 Fragaria x ananassa
FvH4_3g33710 Fragaria vesca
FvH4_4g37251 Fragaria vesca
FvH4_6g48772 Fragaria vesca
FvH4_6g48790 Fragaria vesca
Glyma.12G072600 Glycine max
Gohir.A05G075200 Gossypium hirsutum
Gohir.D05G078000 Gossypium hirsutum
Gorai.009G079500 Gossypium raimondii
GSVIVG01025117001 Vitis vinifera
HanXRQChr02g0051371 Helianthus annuus
Haze_23944 Corylus avellana
Hma1.2p1_2156F.1_g315430 Hydrangea macrophylla
Hund22380 Selenicereus undatus
Lalb_Chr19g0137481 Lupinus albus
Lj1C183G2 Lonicera japonica
Lj1C183T1 Lonicera japonica
Lj1C183T3 Lonicera japonica
Lj3A845T93 Lonicera japonica
Lj3g0007721 Lotus japonicus
Lsat_1_v5_gn_6_24041 Lactuca sativa
Manes.04G026600 Manihot esculenta
Manes.11G140201 Manihot esculenta
Mapoly0009s0037 Marchantia polymorpha
MCO07G761 Micromonas commoda
MD00G1127100 Malus domestica
MD09G1211300 Malus domestica
MD11G1123000 Malus domestica
Medtr4g061080 Medicago truncatula
MELO3C025732.2 Cucumis melo
Migut.N02630 Erythranthe guttata
MSTRG.21151 Avicennia marina
Nitab4.5_0000100g0070 Nicotiana tabacum
Nitab4.5_0000607g0030 Nicotiana tabacum
Nn2g10653 Nelumbo nucifera
Oeu062268.1 Olea europaea
Os11g0102700 Oryza sativa ssp. japonica
Os12g0102350 Oryza sativa ssp. japonica
Os12g0103580 Oryza sativa ssp. japonica
Os12g0127600 Oryza sativa ssp. japonica
Peaxi162Scf00155g00071 Petunia axillaris
PGR119G1466 Punica granatum
PGSC0003DMG400013475 Solanum tuberosum
PGSC0003DMG400034093 Solanum tuberosum
Phvul.011G071700 Phaseolus vulgaris
Potri.013G002700 Populus trichocarpa
Pp3c21_14830 Physcomitrium patens
Prupe.1G350400 Prunus persica
Prupe.6G092400 Prunus persica
Psat7g222000 Pisum sativum
PSO210G2821 Papaver somniferum
PSO210G5092 Papaver somniferum
QL01p000714 Quercus lobata
QL01p036593 Quercus lobata
QL03p001209 Quercus lobata
RcHm_v2.0_Chr4g0447061 Rosa chinensis
RcHm_v2.0_Chr5g0061241 Rosa chinensis
Rhsim01G0221200 Rhododendron simsii
Rhsim01G0258900 Rhododendron simsii
Sabra13G0002300 Salix brachista
Sc06g0007950 Simmondsia chinensis
Sed0015128 Sechium edule
SEGI_39191 Sequoiadendron giganteum
SGA_v2.0_scaffold80G25743 Striga asiatica
SHI06027 Sapria himalayana
Solyc05g005310.3 Solanum lycopersicum
Sopen05g001320 Solanum pennellii
Sp6g21820 Schrenkiella parvula
TAR371G1167 Trochodendron aralioides
TAR371G1244 Trochodendron aralioides
TAR376G0174 Trochodendron aralioides
TAR623G1453 Trochodendron aralioides
TAR629G2862 Trochodendron aralioides
THA.LOC104799482 Tarenaya hassleriana
Thecc.09G261900 Theobroma cacao
Thhalv10014584m.g Eutrema salsugineum
TPR.G2989 Trifolium pratense
TWI75G0497 Tripterygium wilfordii
unitig_0.g1522 Utricularia gibba
vmacro14479 Vaccinium macrocarpon
vmacro14781 Vaccinium macrocarpon
VMungo1127G1062 Vigna mungo
Zm00001eb413910 Zea mays

User provided reference genes

Program Settings