Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12180 Brassica napus
Aa31LG3G8090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3689 Anthoceros agrestis
Actinidia25041 Actinidia chinensis
Actinidia39684 Actinidia chinensis
Ah.07g208350 Amaranthus hybridus
AL8G25910 Arabidopsis lyrata
Aqoxy7G00599 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5J7MDZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R8RU34 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y8CXQ2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZK7SIQ Arachis hypogaea
AT5G51660 Arabidopsis thaliana
ATR0810G058 Amborella trichopoda
Atru.chr1.4080 Acer truncatum
Atru.chr1.628 Acer truncatum
AUR62016090 Chenopodium quinoa
AUR62035037 Chenopodium quinoa
BcaB05g23994 Brassica carinata
BcaC03g14584 Brassica carinata
BolC2t08162H Brassica oleracea
BraA02t06282Z Brassica rapa
C02p20300 Brassica napus
CAN.G916.4 Capsicum annuum
CARHR264330 Cardamine hirsuta
CARHR264420 Cardamine hirsuta
CARHR264430 Cardamine hirsuta
CARHR264440 Cardamine hirsuta
Carub.0008s1166 Capsella rubella
Ca_26390_v3 Cicer arietinum L.
CBR_g28568 Chara braunii
Cc02_g03860 Coffea canephora
CDE12G0311 Ceratophyllum demersum
CDE12G0406 Ceratophyllum demersum
CDE12G0426 Ceratophyllum demersum
CDE12G0834 Ceratophyllum demersum
CDE12G0971 Ceratophyllum demersum
Cfa008231 Carpinus fangiana
Ciclev10004147m.g Citrus clementina
CiPaw.04G063300 Carya illinoinensis
ClCG09G013360 Citrullus lanatus
ClCG09G013370 Citrullus lanatus
ClCG09G013380 Citrullus lanatus
ClCG09G013390 Citrullus lanatus
COL.COLO4_14184 Corchorus olitorius
COL.COLO4_14185 Corchorus olitorius
Cpa.g.sc3.264 Carica papaya
Cpa.g.sc3.265 Carica papaya
Cpa.g.sc3.267 Carica papaya
Cre13.g573450 Chlamydomonas reinhardtii
CsaV3_2G009710 Cucumis sativus L.
CSS0005074 Camellia sinensis var. sinensis
DCAR_005517 Daucus carota
DCAR_016012 Daucus carota
DCAR_028870 Daucus carota
Dinv00168 Davidia involucrata
Dinv02140 Davidia involucrata
Dinv02141 Davidia involucrata
Dinv02142 Davidia involucrata
Dinv22934 Davidia involucrata
Dinv28530 Davidia involucrata
Dinv28531 Davidia involucrata
Duzib068G0276 Durio zibethinus
Duzib205G1350 Durio zibethinus
ECA233G5768 Erigeron canadensis
EL10Ac3g05779 Beta vulgaris
Eucgr.K00143 Eucalyptus grandis
FAN01G1597 Fragaria x ananassa
FAN03G0558 Fragaria x ananassa
FAN03G1790 Fragaria x ananassa
FAN06G1852 Fragaria x ananassa
FAN06G4744 Fragaria x ananassa
FAN10G1553 Fragaria x ananassa
FvH4_7g28210 Fragaria vesca
Glyma.09G153100 Glycine max
Glyma.16G203900 Glycine max
Glyma.17G179000 Glycine max
Gohir.A09G043600 Gossypium hirsutum
Gohir.D09G045100 Gossypium hirsutum
Gorai.006G065300 Gossypium raimondii
GSVIVG01018506001 Vitis vinifera
HanXRQChr02g0041381 Helianthus annuus
HanXRQChr08g0214911 Helianthus annuus
HanXRQChr12g0366371 Helianthus annuus
HanXRQChr14g0451751 Helianthus annuus
Haze_13825 Corylus avellana
Hma1.2p1_0099F.1_g048870 Hydrangea macrophylla
Hma1.2p1_0099F.1_g048890 Hydrangea macrophylla
HPP92_003516 Vanilla planifolia
HPP92_003526 Vanilla planifolia
HPP92_003527 Vanilla planifolia
Hund11791 Selenicereus undatus
Lalb_Chr03g0033081 Lupinus albus
Lj2g0001335 Lotus japonicus
Lj8C36G18 Lonicera japonica
Lsat_1_v5_gn_1_109640 Lactuca sativa
Lsat_1_v5_gn_4_141020 Lactuca sativa
Lsat_1_v5_gn_5_118921 Lactuca sativa
Lsat_1_v5_gn_8_8061 Lactuca sativa
Manes.06G138300 Manihot esculenta
Mapoly0021s0083 Marchantia polymorpha
MBI04_g32240_MAGBIO Magnolia biondii
MCO07G456 Micromonas commoda
MD01G1186100 Malus domestica
MD07G1258300 Malus domestica
Medtr6g461810 Medicago truncatula
MELO3C008722.2 Cucumis melo
Migut.F01168 Erythranthe guttata
Nitab4.5_0000072g0400 Nicotiana tabacum
Nitab4.5_0009404g0010 Nicotiana tabacum
Nn1g01207 Nelumbo nucifera
Oeu021730.2 Olea europaea
Os04g0252200 Oryza sativa ssp. japonica
Peaxi162Scf00192g01018 Petunia axillaris
PGR142G2186 Punica granatum
Phvul.004G126600 Phaseolus vulgaris
Potri.012G022700 Populus trichocarpa
Pp3c11_8810 Physcomitrium patens
PRCOL_00006166 Prasinoderma coloniale
Prupe.2G282700 Prunus persica
Psat1g115120 Pisum sativum
Psat1g115160 Pisum sativum
PSO478G4614 Papaver somniferum
PSO782G0596 Papaver somniferum
QL12p039581 Quercus lobata
RcHm_v2.0_Chr1g0375181 Rosa chinensis
RcHm_v2.0_Chr6g0293481 Rosa chinensis
RcHm_v2.0_Chr7g0227531 Rosa chinensis
Rhsim03G0172000 Rhododendron simsii
Sabra12G0011100 Salix brachista
SalBow2G1183 Salvia bowleyana
Sc17g0003760 Simmondsia chinensis
Sed0016961 Sechium edule
SEGI_01534 Sequoiadendron giganteum
SEGI_07215 Sequoiadendron giganteum
SEGI_12165 Sequoiadendron giganteum
SEGI_20486 Sequoiadendron giganteum
SEGI_35082 Sequoiadendron giganteum
SEGI_37725 Sequoiadendron giganteum
SEGI_39896 Sequoiadendron giganteum
SGA_v2.0_scaffold303G47887 Striga asiatica
SHI13862 Sapria himalayana
SMO356G0002 Selaginella moellendorffii
Solyc03g007100.3 Solanum lycopersicum
Sopen03g003090 Solanum pennellii
Sp6g13860 Schrenkiella parvula
TAR374G0906 Trochodendron aralioides
TAR375G0129 Trochodendron aralioides
TAR375G1017 Trochodendron aralioides
THA.LOC104825074 Tarenaya hassleriana
Thecc.03G162000 Theobroma cacao
Thecc.05G208700 Theobroma cacao
Thecc.05G209000 Theobroma cacao
Thhalv10012441m.g Eutrema salsugineum
TPR.G10680 Trifolium pratense
TPR.G11029 Trifolium pratense
TPR.G35938 Trifolium pratense
TWI39G0431 Tripterygium wilfordii
unitig_0.g469 Utricularia gibba
vmacro06764 Vaccinium macrocarpon
VMungo0464G1100 Vigna mungo
Zm00001eb086790 Zea mays

User provided reference genes

Program Settings