Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p00990 Brassica napus
Aa31LG5G1150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.256 Anthoceros agrestis
Actinidia08006 Actinidia chinensis
Ah.05g178970 Amaranthus hybridus
Ah.07g200480 Amaranthus hybridus
AL6G52660 Arabidopsis lyrata
Aqoxy5G04345 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9PW2R5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H04KSL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IVU47Y Arachis hypogaea
AT4G00800 Arabidopsis thaliana
ATR0304G014 Amborella trichopoda
ATR0304G056 Amborella trichopoda
Atru.chr5.766 Acer truncatum
AUR62004560 Chenopodium quinoa
AUR62022676 Chenopodium quinoa
BcaB01g02313 Brassica carinata
BcaB01g02314 Brassica carinata
BcaB01g02315 Brassica carinata
BcaC04g24098 Brassica carinata
BolC9t53041H Brassica oleracea
BraA09t35770Z Brassica rapa
C09p01080 Brassica napus
CAN.G1674.1 Capsicum annuum
CAN.G929.32 Capsicum annuum
CAN.G929.33 Capsicum annuum
CAN.G929.34 Capsicum annuum
CARHR249530 Cardamine hirsuta
Carub.0006s3583 Capsella rubella
Ca_09729_v3 Cicer arietinum L.
Ca_26063_v3 Cicer arietinum L.
CBR_g34692 Chara braunii
Cc00_g00890 Coffea canephora
Cc00_g18720 Coffea canephora
Cc00_g21570 Coffea canephora
Cc00_g33390 Coffea canephora
Cc02_g39950 Coffea canephora
Cc05_g02700 Coffea canephora
Cc06_g21290 Coffea canephora
Cc07_g19980 Coffea canephora
Cc08_g08700 Coffea canephora
CDE02G2120 Ceratophyllum demersum
Cfa003736 Carpinus fangiana
Cfa022536 Carpinus fangiana
Ciclev10018449m.g Citrus clementina
CiPaw.01G082300 Carya illinoinensis
ClCG05G000190 Citrullus lanatus
COL.COLO4_23048 Corchorus olitorius
Cpa.g.sc123.3 Carica papaya
Cpa.g.sc193.10 Carica papaya
Cpa.g.sc193.11 Carica papaya
Cpa.g.sc193.6 Carica papaya
Cre13.g606350 Chlamydomonas reinhardtii
CsaV3_3G007340 Cucumis sativus L.
CSS0004566 Camellia sinensis var. sinensis
CSS0009785 Camellia sinensis var. sinensis
DCAR_013954 Daucus carota
Dinv34257 Davidia involucrata
Duzib138G1478 Durio zibethinus
ECA233G3878 Erigeron canadensis
EL10Ac1g00187 Beta vulgaris
Eucgr.D02650 Eucalyptus grandis
FAN01G0919 Fragaria x ananassa
FAN03G2506 Fragaria x ananassa
FAN06G0139 Fragaria x ananassa
FAN06G0296 Fragaria x ananassa
FAN07G0466 Fragaria x ananassa
FAN07G2918 Fragaria x ananassa
FAN08G3289 Fragaria x ananassa
FAN10G1489 Fragaria x ananassa
FAN10G3859 Fragaria x ananassa
FvH4_7g17640 Fragaria vesca
Glyma.07G049700 Glycine max
Glyma.16G018400 Glycine max
Gohir.A12G116600 Gossypium hirsutum
Gohir.D12G120100 Gossypium hirsutum
Gorai.008G130800 Gossypium raimondii
GSVIVG01027438001 Vitis vinifera
HanXRQChr11g0352941 Helianthus annuus
HanXRQChr11g0352951 Helianthus annuus
HanXRQChr14g0436131 Helianthus annuus
HanXRQChr14g0445111 Helianthus annuus
Haze_15733 Corylus avellana
Hma1.2p1_0074F.1_g038700 Hydrangea macrophylla
Hma1.2p1_0074F.1_g038710 Hydrangea macrophylla
Hma1.2p1_0074F.1_g038720 Hydrangea macrophylla
HPP92_014634 Vanilla planifolia
HPP92_014635 Vanilla planifolia
Hund27149 Selenicereus undatus
Lalb_Chr10g0100861 Lupinus albus
Lj3g0000602 Lotus japonicus
Lj9C607G8 Lonicera japonica
Lsat_1_v5_gn_3_140700 Lactuca sativa
Lsat_1_v5_gn_7_90420 Lactuca sativa
Manes.01G240000 Manihot esculenta
Mapoly0036s0138 Marchantia polymorpha
Mapoly0063s0095 Marchantia polymorpha
MBI12_g11801_MAGBIO Magnolia biondii
MD07G1159400 Malus domestica
Medtr8g024320 Medicago truncatula
MELO3C005953.2 Cucumis melo
Migut.B01921 Erythranthe guttata
MSTRG.17382 Avicennia marina
Nitab4.5_0000006g0150 Nicotiana tabacum
Nitab4.5_0011074g0010 Nicotiana tabacum
Nn3g18803 Nelumbo nucifera
Oeu028215.3 Olea europaea
Os02g0124700 Oryza sativa ssp. japonica
Os10g0182300 Oryza sativa ssp. japonica
Peaxi162Scf00462g00512 Petunia axillaris
PGR031G1055 Punica granatum
Phvul.002G075100 Phaseolus vulgaris
Phvul.010G119400 Phaseolus vulgaris
Phvul.011G172900 Phaseolus vulgaris
Potri.014G105601 Populus trichocarpa
Pp3c17_2710 Physcomitrium patens
Pp3c7_20800 Physcomitrium patens
Prupe.2G197500 Prunus persica
Psat0s2140g0040 Pisum sativum
Psat0s3706g0080 Pisum sativum
Psat1g112240 Pisum sativum
Psat3g045760 Pisum sativum
Psat3g157320 Pisum sativum
Psat4g164000 Pisum sativum
PSO063G6286 Papaver somniferum
PSO782G2296 Papaver somniferum
QL08p047226 Quercus lobata
QL10p065016 Quercus lobata
QL10p065024 Quercus lobata
RcHm_v2.0_Chr1g0361071 Rosa chinensis
RcHm_v2.0_Chr1g0361181 Rosa chinensis
Rhsim07G0000300 Rhododendron simsii
Sabra14G0077700 Salix brachista
SalBow3G1181 Salvia bowleyana
SalBow3G3735 Salvia bowleyana
Sc01g0002200 Simmondsia chinensis
Sc25g0003360 Simmondsia chinensis
Sed0010760 Sechium edule
SEGI_06399 Sequoiadendron giganteum
SEGI_11710 Sequoiadendron giganteum
SEGI_29076 Sequoiadendron giganteum
SEGI_35470 Sequoiadendron giganteum
SGA_v2.0_scaffold98G29423 Striga asiatica
SHI29617 Sapria himalayana
SHI29621 Sapria himalayana
SMO114G0120 Selaginella moellendorffii
Solyc05g044610.3 Solanum lycopersicum
Sopen05g026910 Solanum pennellii
Sp6g01320 Schrenkiella parvula
TAR629G0818 Trochodendron aralioides
TAR629G2483 Trochodendron aralioides
TAR636G2848 Trochodendron aralioides
THA.LOC104801349 Tarenaya hassleriana
Thecc.01G333400 Theobroma cacao
Thhalv10028358m.g Eutrema salsugineum
TPR.G19826 Trifolium pratense
TWI59G0442 Tripterygium wilfordii
unitig_736.g22806 Utricularia gibba
vmacro00026 Vaccinium macrocarpon
vmacro00027 Vaccinium macrocarpon
VMungo0331G0990 Vigna mungo
Zm00001eb230740 Zea mays

User provided reference genes

Program Settings