Gene: Pp3c17_2710
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c17_2710
- Transcript Identifier Pp3c17_2710V3.1
- Gene Type Coding gene
- Location Chr17 : 2133132-2142984 : positive
Gene Family Information
- ID HOM05D004392
- #Genes/#Species 163/96
- Phylogenetic origin
- ID ORTHO05D004846
- #Genes/#Species 170/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c17_2710V3.1
- pacid 32906176
- alias Phypa_90137
- alias Pp1s193_48V6
- uniprot A0A2K1J2J2
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | GOA Database | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0006623 | IBA IEA | GOA Database | protein targeting to vacuole | |
| GO:0006623 | IEA | InterPro | protein targeting to vacuole | |
| GO:0034058 | IBA | GOA Database | endosomal vesicle fusion | |
| GO:0009555 | ISO | PLAZA Integrative Orthology | pollen development | AT4G00800 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005770 | IBA | GOA Database | late endosome | |
| GO:0030897 | IBA | GOA Database | HOPS complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000547 | Clathrin, heavy chain/VPS, 7-fold repeat |
| IPR001680 | WD40 repeat |
| IPR024977 | Anaphase-promoting complex subunit 4, WD40 domain |
| IPR045111 | Vacuolar protein sorting-associated protein Vps41/Vps8 |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR025941 | Vacuolar protein sorting-associated protein 8, central domain |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| Mapman id | Description |
|---|---|
| 22.3.4.9.8 | Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.CORVET-specific component VPS8 |