Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00960 Brassica napus
A09p57580 Brassica napus
Aa31LG6G15170 Aethionema arabicum
Aa31LG7G14400 Aethionema arabicum
Aa31LG7G15420 Aethionema arabicum
Actinidia09657 Actinidia chinensis
Actinidia20702 Actinidia chinensis
Ah.02g130970 Amaranthus hybridus
AL4G11930 Arabidopsis lyrata
AL7G12360 Arabidopsis lyrata
Aqoxy5G03398 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea
AT2G22425 Arabidopsis thaliana
AT4G40042 Arabidopsis thaliana
ATR0561G166 Amborella trichopoda
ATR1098G064 Amborella trichopoda
Atru.chr11.2308 Acer truncatum
AUR62024125 Chenopodium quinoa
BcaB08g35066 Brassica carinata
BcaC07g41074 Brassica carinata
BcaNung00935 Brassica carinata
BolC1t00106H Brassica oleracea
BolC8t51641H Brassica oleracea
BraA01t00094Z Brassica rapa
BraA09t41150Z Brassica rapa
C08p40770 Brassica napus
CAN.G638.34 Capsicum annuum
CANSAT80G1060 Cannabis sativa
CARHR089330 Cardamine hirsuta
CARHR113610 Cardamine hirsuta
CARHR246620 Cardamine hirsuta
Carub.0003s1416 Capsella rubella
Carub.0004s0159 Capsella rubella
Carub.0007s0202 Capsella rubella
Ca_16468_v3 Cicer arietinum L.
Ca_18042_v3 Cicer arietinum L.
CBR_g48133 Chara braunii
Cc11_g00910 Coffea canephora
Cfa009329 Carpinus fangiana
CiPaw.05G111600 Carya illinoinensis
CiPaw.06G101400 Carya illinoinensis
ClCG09G006830 Citrullus lanatus
ClCG11G013760 Citrullus lanatus
Cpa.g.sc34.218 Carica papaya
CsaV3_5G030350 Cucumis sativus L.
CSS0004094 Camellia sinensis var. sinensis
CSS0024228 Camellia sinensis var. sinensis
CSS0048605 Camellia sinensis var. sinensis
DCAR_007008 Daucus carota
Duzib248G1577 Durio zibethinus
Duzib251G0716 Durio zibethinus
Duzib268G0993 Durio zibethinus
ECA233G0624 Erigeron canadensis
ECA240G0924 Erigeron canadensis
EL10Ac6g13484 Beta vulgaris
Eucgr.B03484 Eucalyptus grandis
FAN07G0791 Fragaria x ananassa
FAN17G1207 Fragaria x ananassa
FAN22G0688 Fragaria x ananassa
FvH4_4g23930 Fragaria vesca
Glyma.05G146700 Glycine max
Glyma.08G103600 Glycine max
Glyma.11G249600 Glycine max
Glyma.18G007600 Glycine max
Gohir.A01G155400 Gossypium hirsutum
Gohir.A12G148600 Gossypium hirsutum
Gohir.D01G154700 Gossypium hirsutum
Gohir.D12G152500 Gossypium hirsutum
Gorai.002G191500 Gossypium raimondii
Gorai.008G164900 Gossypium raimondii
GSVIVG01010448001 Vitis vinifera
HanXRQChr08g0207731 Helianthus annuus
Haze_10374 Corylus avellana
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla
HPP92_024177 Vanilla planifolia
Hund25458 Selenicereus undatus
Lalb_Chr07g0187411 Lupinus albus
Lalb_Chr12g0206281 Lupinus albus
Lalb_Chr22g0358881 Lupinus albus
Lj4g0026719 Lotus japonicus
Lj7E465T0 Lonicera japonica
Lsat_1_v5_gn_3_29821 Lactuca sativa
Lsat_1_v5_gn_8_149361 Lactuca sativa
Manes.12G012800 Manihot esculenta
Manes.13G018500 Manihot esculenta
Mapoly0041s0086 Marchantia polymorpha
MBI05_g44034_MAGBIO Magnolia biondii
MBI07_g34630_MAGBIO Magnolia biondii
MBI11_g07456_MAGBIO Magnolia biondii
MBI13_g26147_MAGBIO Magnolia biondii
MCO16G111 Micromonas commoda
MD13G1117200 Malus domestica
Medtr3g085510 Medicago truncatula
Medtr8g080380 Medicago truncatula
MELO3C011874.2 Cucumis melo
Migut.E00025 Erythranthe guttata
Migut.K00715 Erythranthe guttata
Nitab4.5_0000367g0030 Nicotiana tabacum
Nitab4.5_0000379g0030 Nicotiana tabacum
Nitab4.5_0000592g0450 Nicotiana tabacum
Nitab4.5_0002210g0100 Nicotiana tabacum
Nn1g04852 Nelumbo nucifera
Nn3g16498 Nelumbo nucifera
Nn4g22350 Nelumbo nucifera
Oeu058917.1 Olea europaea
Os12g0438900 Oryza sativa ssp. japonica
Peaxi162Scf00128g01124 Petunia axillaris
PGR102G2095 Punica granatum
Phvul.001G260900 Phaseolus vulgaris
Phvul.002G174400 Phaseolus vulgaris
Potri.008G175775 Populus trichocarpa
Potri.010G059300 Populus trichocarpa
Pp3c10_14440 Physcomitrium patens
Pp3c3_460 Physcomitrium patens
Pp3c4_12150 Physcomitrium patens
PRCOL_00005433 Prasinoderma coloniale
Prupe.1G228300 Prunus persica
Psat4g014960 Pisum sativum
Psat5g095200 Pisum sativum
PSO017G1102 Papaver somniferum
PSO063G2970 Papaver somniferum
PSO478G0183 Papaver somniferum
PSO782G4737 Papaver somniferum
QL03p053718 Quercus lobata
QL12p006243 Quercus lobata
RcHm_v2.0_Chr4g0430591 Rosa chinensis
Rhsim10G0039200 Rhododendron simsii
Rhsim12G0027700 Rhododendron simsii
Sabra08G0134000 Salix brachista
Sc11g0000500 Simmondsia chinensis
Sed0024223 Sechium edule
SEGI_16803 Sequoiadendron giganteum
SEGI_28711 Sequoiadendron giganteum
SMO145G0172 Selaginella moellendorffii
SMO197G0059 Selaginella moellendorffii
SMO364G0480 Selaginella moellendorffii
Solyc03g005740.3 Solanum lycopersicum
Sopen03g001750 Solanum pennellii
Sp3g12740 Schrenkiella parvula
Sp7g35820 Schrenkiella parvula
SpUn0131_0010 Schrenkiella parvula
TAR371G0820 Trochodendron aralioides
TAR622G0138 Trochodendron aralioides
TAR629G1658 Trochodendron aralioides
THA.LOC104824890 Tarenaya hassleriana
THA.LOC104824892 Tarenaya hassleriana
THA.LOC104824895 Tarenaya hassleriana
THA.LOC104824896 Tarenaya hassleriana
THA.LOC104824898 Tarenaya hassleriana
THA.LOC109116235 Tarenaya hassleriana
Thecc.02G210700 Theobroma cacao
Thhalv10000378m.g Eutrema salsugineum
Thhalv10021836m.g Eutrema salsugineum
Thhalv10027263m.g Eutrema salsugineum
TPR.G10940 Trifolium pratense
TPR.G28271 Trifolium pratense
TWI18G1082 Tripterygium wilfordii
TWI36G1003 Tripterygium wilfordii
TWI75G0215 Tripterygium wilfordii
Zm00001eb052740 Zea mays
Zm00001eb218300 Zea mays

User provided reference genes

Program Settings