Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p22470 Brassica napus
A07p27340 Brassica napus
A07p44190 Brassica napus
Aa31LG4G1950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2640 Anthoceros agrestis
Actinidia37109 Actinidia chinensis
Ah.08g216320 Amaranthus hybridus
AL2G39500 Arabidopsis lyrata
Aqoxy1G01569 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9QX17Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HCTL36 Arachis hypogaea
AT1G79040 Arabidopsis thaliana
ATR1098G153 Amborella trichopoda
Atru.chr2.1854 Acer truncatum
Atru.chr6.732 Acer truncatum
AUR62004366 Chenopodium quinoa
AUR62022575 Chenopodium quinoa
BcaB02g07194 Brassica carinata
BcaB02g08662 Brassica carinata
BcaB05g25168 Brassica carinata
BcaC03g15860 Brassica carinata
BcaC08g45389 Brassica carinata
BcaC08g47468 Brassica carinata
BolC2t09629H Brassica oleracea
BolC6t38183H Brassica oleracea
BolC6t40310H Brassica oleracea
BraA02t07252Z Brassica rapa
BraA07t30375Z Brassica rapa
BraA07t31927Z Brassica rapa
C02p36150 Brassica napus
C06p30200 Brassica napus
C06p52920 Brassica napus
CAN.G943.25 Capsicum annuum
CANSAT56G1367 Cannabis sativa
CARHR072720 Cardamine hirsuta
Carub.0002s2591 Capsella rubella
Ca_03704_v3 Cicer arietinum L.
Cc05_g15930 Coffea canephora
CDE04G0985 Ceratophyllum demersum
CDE11G0376 Ceratophyllum demersum
CDE12G0390 Ceratophyllum demersum
Ciclev10022793m.g Citrus clementina
CiPaw.11G067100 Carya illinoinensis
ClCG07G010700 Citrullus lanatus
ClCG11G016280 Citrullus lanatus
COL.COLO4_05073 Corchorus olitorius
Cpa.g.c37194 Carica papaya
Cpa.g.c38697 Carica papaya
Cre06.g261000 Chlamydomonas reinhardtii
CsaV3_4G007600 Cucumis sativus L.
CSS0001445 Camellia sinensis var. sinensis
CSS0016237 Camellia sinensis var. sinensis
DCAR_009633 Daucus carota
DCAR_013749 Daucus carota
DCAR_016816 Daucus carota
Duzib187G1376 Durio zibethinus
ECA236G0888 Erigeron canadensis
EL10Ac4g08547 Beta vulgaris
Eucgr.F01447 Eucalyptus grandis
Eucgr.F03186 Eucalyptus grandis
FAN11G1612 Fragaria x ananassa
FAN21G1818 Fragaria x ananassa
FAN25G3309 Fragaria x ananassa
FvH4_3g16050 Fragaria vesca
Glyma.08G173700 Glycine max
Glyma.15G253700 Glycine max
Gohir.A01G037100 Gossypium hirsutum
Gohir.A04G050200 Gossypium hirsutum
Gohir.D01G024400 Gossypium hirsutum
Gohir.D05G330700 Gossypium hirsutum
Gorai.002G032900 Gossypium raimondii
Gorai.009G354500 Gossypium raimondii
GSVIVG01020484001 Vitis vinifera
HanXRQChr05g0160651 Helianthus annuus
HanXRQChr08g0232801 Helianthus annuus
Haze_08525 Corylus avellana
Hma1.2p1_0193F.1_g084500 Hydrangea macrophylla
Hma1.2p1_0321F.1_g124500 Hydrangea macrophylla
HPP92_016563 Vanilla planifolia
Hund10309 Selenicereus undatus
Lalb_Chr01g0015971 Lupinus albus
Lalb_Chr03g0031561 Lupinus albus
Lalb_Chr25g0285191 Lupinus albus
Lj3g0019499 Lotus japonicus
Lsat_1_v5_gn_7_116120 Lactuca sativa
Manes.03G082900 Manihot esculenta
Manes.15G102500 Manihot esculenta
Mapoly0001s0109 Marchantia polymorpha
Mapoly0006s0055 Marchantia polymorpha
MBI02_g25371_MAGBIO Magnolia biondii
MBI18_g37150_MAGBIO Magnolia biondii
MD05G1215200 Malus domestica
MD10G1198300 Malus domestica
Medtr2g064650 Medicago truncatula
MELO3C016181.2 Cucumis melo
Migut.H01700 Erythranthe guttata
MSTRG.14535 Avicennia marina
MSTRG.7052 Avicennia marina
Nitab4.5_0000134g0030 Nicotiana tabacum
Nitab4.5_0000313g0040 Nicotiana tabacum
Nitab4.5_0001791g0030 Nicotiana tabacum
Nitab4.5_0002475g0030 Nicotiana tabacum
Oeu002809.1 Olea europaea
Oeu003841.1 Olea europaea
Os07g0147500 Oryza sativa ssp. japonica
Os07g0147550 Oryza sativa ssp. japonica
Os08g0200300 Oryza sativa ssp. japonica
Peaxi162Scf00006g00149 Petunia axillaris
Peaxi162Scf00232g01129 Petunia axillaris
PGR083G0343 Punica granatum
PGR142G2616 Punica granatum
PGSC0003DMG400002312 Solanum tuberosum
PGSC0003DMG400022241 Solanum tuberosum
Phvul.005G055200 Phaseolus vulgaris
Potri.001G438700 Populus trichocarpa
Potri.001G438800 Populus trichocarpa
Potri.011G142200 Populus trichocarpa
Potri.011G142300 Populus trichocarpa
Pp3c16_5650 Physcomitrium patens
Pp3c27_2320 Physcomitrium patens
Pp3c27_2340 Physcomitrium patens
Pp3c5_4230 Physcomitrium patens
PRCOL_00003342 Prasinoderma coloniale
Prupe.4G143700 Prunus persica
Psat1g002320 Pisum sativum
PSO541G1472 Papaver somniferum
PSO541G3267 Papaver somniferum
PSO675G7775 Papaver somniferum
QL04p074767 Quercus lobata
RcHm_v2.0_Chr5g0027021 Rosa chinensis
Rhsim04G0006200 Rhododendron simsii
Sabra11G0127600 Salix brachista
Sabra11G0127700 Salix brachista
Sabra16G0296700 Salix brachista
SalBow5G1313 Salvia bowleyana
SalBow5G2519 Salvia bowleyana
SalBow8G0430 Salvia bowleyana
Sc16g0003480 Simmondsia chinensis
Sed0014118 Sechium edule
Sed0016780 Sechium edule
Sed0025739 Sechium edule
SEGI_14655 Sequoiadendron giganteum
SGA_v2.0_scaffold49G18168 Striga asiatica
SMO134G0197 Selaginella moellendorffii
Solyc07g066310.3 Solanum lycopersicum
Solyc12g017250.2 Solanum lycopersicum
Sopen07g034490 Solanum pennellii
Sopen12g008070 Solanum pennellii
Sp5g34090 Schrenkiella parvula
TAR626G0945 Trochodendron aralioides
TAR627G0744 Trochodendron aralioides
THA.LOC104812349 Tarenaya hassleriana
Thecc.07G156900 Theobroma cacao
Thhalv10019302m.g Eutrema salsugineum
TPR.G10344 Trifolium pratense
TPR.G25891 Trifolium pratense
TWI38G0568 Tripterygium wilfordii
TWI38G0625 Tripterygium wilfordii
unitig_8.g4771 Utricularia gibba
vmacro09788 Vaccinium macrocarpon
vmacro11652 Vaccinium macrocarpon
VMungo1080G1647 Vigna mungo
Zm00001eb171230 Zea mays

User provided reference genes

Program Settings