Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p11150 Brassica napus
Aa31LG3G10140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2149 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.2151 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.745 Anthoceros agrestis
Actinidia09681 Actinidia chinensis
Actinidia12812 Actinidia chinensis
Ah.06g184060 Amaranthus hybridus
AL8G28710 Arabidopsis lyrata
Aqoxy4G00819 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6ZWE2K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SV3A8G Arachis hypogaea
AT5G53770 Arabidopsis thaliana
ATR0730G126 Amborella trichopoda
Atru.chr2.2651 Acer truncatum
Atru.chr2.2673 Acer truncatum
AUR62029381 Chenopodium quinoa
AUR62034287 Chenopodium quinoa
BcaB05g22072 Brassica carinata
BcaB08g35738 Brassica carinata
BcaC03g14387 Brassica carinata
BcaC04g19140 Brassica carinata
BcaC04g20419 Brassica carinata
BolC2t07929H Brassica oleracea
BolC9t57258H Brassica oleracea
BraA10t43208Z Brassica rapa
C02p17970 Brassica napus
C09p43730 Brassica napus
CARHR266920 Cardamine hirsuta
Carub.0008s1407 Capsella rubella
Ca_01836_v3 Cicer arietinum L.
CBR_g262 Chara braunii
CBR_g39468 Chara braunii
Cc00_g35090 Coffea canephora
Cc05_g12110 Coffea canephora
CDE10G0244 Ceratophyllum demersum
Cfa020594 Carpinus fangiana
Cfa023242 Carpinus fangiana
Ciclev10008024m.g Citrus clementina
Ciclev10008854m.g Citrus clementina
CiPaw.11G168700 Carya illinoinensis
ClCG11G018120 Citrullus lanatus
COL.COLO4_09395 Corchorus olitorius
Cpa.g.sc80.55 Carica papaya
Cre09.g403000 Chlamydomonas reinhardtii
Cre09.g410500 Chlamydomonas reinhardtii
Cre13.g574200 Chlamydomonas reinhardtii
Cre17.g720750 Chlamydomonas reinhardtii
CsaV3_4G033760 Cucumis sativus L.
CSS0006675 Camellia sinensis var. sinensis
CSS0017665 Camellia sinensis var. sinensis
CSS0018031 Camellia sinensis var. sinensis
CSS0018352 Camellia sinensis var. sinensis
CSS0022374 Camellia sinensis var. sinensis
CSS0023608 Camellia sinensis var. sinensis
CSS0029491 Camellia sinensis var. sinensis
CSS0038230 Camellia sinensis var. sinensis
CSS0040030 Camellia sinensis var. sinensis
CSS0040505 Camellia sinensis var. sinensis
DCAR_017144 Daucus carota
Dinv04310 Davidia involucrata
Dinv15176 Davidia involucrata
Dinv20794 Davidia involucrata
Duzib213G0391 Durio zibethinus
ECA234G0664 Erigeron canadensis
EL10Ac4g08166 Beta vulgaris
Eucgr.F01119 Eucalyptus grandis
FAN16G0302 Fragaria x ananassa
FAN21G3330 Fragaria x ananassa
FAN25G3266 Fragaria x ananassa
FvH4_3g20190 Fragaria vesca
Glyma.13G277700 Glycine max
Gohir.A01G064120 Gossypium hirsutum
Gohir.A05G179700 Gossypium hirsutum
Gohir.A08G145700 Gossypium hirsutum
Gohir.A12G128900 Gossypium hirsutum
Gohir.D01G051200 Gossypium hirsutum
Gorai.002G071000 Gossypium raimondii
GSVIVG01014349001 Vitis vinifera
HanXRQChr12g0361521 Helianthus annuus
Haze_09419 Corylus avellana
Hma1.2p1_0480F.1_g161800 Hydrangea macrophylla
Hma1.2p1_0480F.1_g161810 Hydrangea macrophylla
Hma1.2p1_2210F.1_g317160 Hydrangea macrophylla
HPP92_007964 Vanilla planifolia
HPP92_008014 Vanilla planifolia
Hund22921 Selenicereus undatus
Lalb_Chr25g0286441 Lupinus albus
Lj1A844G36 Lonicera japonica
Lj3g0015758 Lotus japonicus
Lsat_1_v5_gn_5_127821 Lactuca sativa
Manes.03G110700 Manihot esculenta
Mapoly0006s0037 Marchantia polymorpha
Mapoly0145s0022 Marchantia polymorpha
MBI07_g32654_MAGBIO Magnolia biondii
MCO11G842 Micromonas commoda
MCO14G101 Micromonas commoda
MCO14G116 Micromonas commoda
MD01G1239400 Malus domestica
MD03G1226500 Malus domestica
MD10G1025000 Malus domestica
MD11G1244500 Malus domestica
MD11G1244600 Malus domestica
Medtr2g079330 Medicago truncatula
MELO3C016705.2 Cucumis melo
Migut.M00812 Erythranthe guttata
MSTRG.15226 Avicennia marina
Nitab4.5_0000207g0150 Nicotiana tabacum
Nitab4.5_0002383g0110 Nicotiana tabacum
Nn1g06556 Nelumbo nucifera
Oeu005412.1 Olea europaea
Oeu060551.2 Olea europaea
Os01g0672700 Oryza sativa ssp. japonica
Peaxi162Scf00027g02615 Petunia axillaris
PGR083G2352 Punica granatum
PGSC0003DMG400025036 Solanum tuberosum
Phvul.005G070800 Phaseolus vulgaris
Potri.001G400800 Populus trichocarpa
Pp3c24_20390 Physcomitrium patens
PRCOL_00005020 Prasinoderma coloniale
Prupe.4G182900 Prunus persica
Psat5g242760 Pisum sativum
PSO210G1788 Papaver somniferum
QL05p086109 Quercus lobata
QL05p086116 Quercus lobata
QL08p021548 Quercus lobata
RcHm_v2.0_Chr5g0034001 Rosa chinensis
Rhsim06G0197900 Rhododendron simsii
Sabra16G0262900 Salix brachista
SalBow8G0254 Salvia bowleyana
SalBow8G3529 Salvia bowleyana
Sc16g0006960 Simmondsia chinensis
Sed0004687 Sechium edule
SEGI_01564 Sequoiadendron giganteum
SEGI_02461 Sequoiadendron giganteum
SEGI_38687 Sequoiadendron giganteum
SEGI_40468 Sequoiadendron giganteum
SGA_v2.0_scaffold34G13821 Striga asiatica
SGA_v2.0_scaffold73G24268 Striga asiatica
SMO356G0731 Selaginella moellendorffii
Solyc10g006990.3 Solanum lycopersicum
Sopen10g002900 Solanum pennellii
Sp6g15840 Schrenkiella parvula
TAR624G0790 Trochodendron aralioides
THA.LOC104799923 Tarenaya hassleriana
Thecc.07G087300 Theobroma cacao
Thhalv10013073m.g Eutrema salsugineum
TPR.G15313 Trifolium pratense
TPR.G15327 Trifolium pratense
TPR.G18089 Trifolium pratense
TPR.G20894 Trifolium pratense
TPR.G29961 Trifolium pratense
TPR.G29966 Trifolium pratense
TPR.G38001 Trifolium pratense
TPR.G38993 Trifolium pratense
TWI38G0759 Tripterygium wilfordii
TWI39G0928 Tripterygium wilfordii
unitig_899.g15291 Utricularia gibba
vmacro11860 Vaccinium macrocarpon
vmacro18312 Vaccinium macrocarpon
vmacro22868 Vaccinium macrocarpon
VMungo1080G0845 Vigna mungo
VMungo1080G1289 Vigna mungo
Zm00001eb157140 Zea mays

User provided reference genes

Program Settings