Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21760 Brassica napus
A03p49320 Brassica napus
A08p11960 Brassica napus
Aa31LG10G6340 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5155 Anthoceros agrestis
Actinidia01468 Actinidia chinensis
Actinidia40262 Actinidia chinensis
Ah.05g167830 Amaranthus hybridus
AL7G39540 Arabidopsis lyrata
Aqoxy2G03013 Aquilegia oxysepala
Aqoxy5G03978 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F4LE79 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4RKM8 Arachis hypogaea
AT4G15770 Arabidopsis thaliana
ATR0706G220 Amborella trichopoda
Atru.chr4.2815 Acer truncatum
AUR62010283 Chenopodium quinoa
AUR62039106 Chenopodium quinoa
BcaB04g18325 Brassica carinata
BcaC02g09747 Brassica carinata
BcaC06g32960 Brassica carinata
BcaC06g32963 Brassica carinata
BcaC06g33449 Brassica carinata
BcaC07g37931 Brassica carinata
BcaC09g50269 Brassica carinata
BolC1t02658H Brassica oleracea
BolC4t25273H Brassica oleracea
BolC7t45266H Brassica oleracea
BolC8t48316H Brassica oleracea
BraA01t02085Z Brassica rapa
BraA03t14033Z Brassica rapa
BraA08t33187Z Brassica rapa
C01p27110 Brassica napus
C07p47390 Brassica napus
CAN.G134.195 Capsicum annuum
CANSAT11G1206 Cannabis sativa
CANSAT56G3245 Cannabis sativa
CARHR290260 Cardamine hirsuta
Carub.0007s2590 Capsella rubella
Ca_15496_v3 Cicer arietinum L.
Ca_21528_v3 Cicer arietinum L.
CBR_g101 Chara braunii
Cc00_g10540 Coffea canephora
CDE05G0863 Ceratophyllum demersum
CDE05G1737 Ceratophyllum demersum
CDE05G2612 Ceratophyllum demersum
Cfa015376 Carpinus fangiana
Cfa022336 Carpinus fangiana
Ciclev10005994m.g Citrus clementina
CiPaw.01G149400 Carya illinoinensis
Cpa.g.sc16.164 Carica papaya
Cre12.g528900 Chlamydomonas reinhardtii
CsaV3_3G014560 Cucumis sativus L.
CSS0031921 Camellia sinensis var. sinensis
CSS0044915 Camellia sinensis var. sinensis
DCAR_003777 Daucus carota
Dinv29769 Davidia involucrata
Dinv44388 Davidia involucrata
Duzib052G0564 Durio zibethinus
Duzib212G1021 Durio zibethinus
ECA246G2248 Erigeron canadensis
EL10Ac1g01881 Beta vulgaris
EL10Ac1g01907 Beta vulgaris
EL10Ac2g03799 Beta vulgaris
Eucgr.C01884 Eucalyptus grandis
Eucgr.L03020 Eucalyptus grandis
FAN02G1421 Fragaria x ananassa
FAN05G2426 Fragaria x ananassa
FAN14G4293 Fragaria x ananassa
FAN17G1564 Fragaria x ananassa
FAN22G1477 Fragaria x ananassa
FvH4_4g00380 Fragaria vesca
FvH4_6g25030 Fragaria vesca
Glyma.05G031500 Glycine max
Glyma.17G095400 Glycine max
Gohir.A01G031201 Gossypium hirsutum
Gohir.D01G023472 Gossypium hirsutum
Gorai.002G028000 Gossypium raimondii
GSVIVG01017749001 Vitis vinifera
GSVIVG01038238001 Vitis vinifera
HanXRQChr05g0151141 Helianthus annuus
HanXRQChr15g0467261 Helianthus annuus
Haze_01219 Corylus avellana
Haze_26515 Corylus avellana
Hma1.2p1_0698F.1_g205210 Hydrangea macrophylla
HPP92_025218 Vanilla planifolia
Lalb_Chr07g0177681 Lupinus albus
Lalb_Chr13g0303661 Lupinus albus
Lj6g0015098 Lotus japonicus
Lj6P674T13 Lonicera japonica
Lsat_1_v5_gn_7_66041 Lactuca sativa
Manes.03G194200 Manihot esculenta
Manes.15G013200 Manihot esculenta
Mapoly0063s0083 Marchantia polymorpha
MCO05G615 Micromonas commoda
MD03G1177300 Malus domestica
MD17G1218500 Malus domestica
Medtr3g112090 Medicago truncatula
MELO3C006657.2 Cucumis melo
Migut.G00171 Erythranthe guttata
MSTRG.3927 Avicennia marina
Nitab4.5_0000250g0130 Nicotiana tabacum
Nitab4.5_0002393g0040 Nicotiana tabacum
Nn4g25890 Nelumbo nucifera
Nn8g40841 Nelumbo nucifera
Oeu027660.1 Olea europaea
Oeu027731.1 Olea europaea
Oeu041102.1 Olea europaea
Os07g0670600 Oryza sativa ssp. japonica
Peaxi162Scf00096g00093 Petunia axillaris
Peaxi162Scf00399g00066 Petunia axillaris
PGR031G1479 Punica granatum
PGSC0003DMG400022496 Solanum tuberosum
Phvul.003G104500 Phaseolus vulgaris
Potri.008G209600 Populus trichocarpa
Potri.010G024400 Populus trichocarpa
Pp3c15_15310 Physcomitrium patens
PRCOL_00000387 Prasinoderma coloniale
Prupe.3G093900 Prunus persica
Prupe.7G008800 Prunus persica
Prupe.7G009000 Prunus persica
Psat0s12239g0040 Pisum sativum
Psat4g036040 Pisum sativum
Psat5g016440 Pisum sativum
Psat7g055160 Pisum sativum
Psat7g055200 Pisum sativum
PSO063G3233 Papaver somniferum
PSO170G0314 Papaver somniferum
PSO541G6165 Papaver somniferum
PSO675G6259 Papaver somniferum
QL06p008685 Quercus lobata
RcHm_v2.0_Chr1g0332291 Rosa chinensis
RcHm_v2.0_Chr7g0221961 Rosa chinensis
Rhsim04G0220600 Rhododendron simsii
Sabra10G0014700 Salix brachista
SalBow2G1272 Salvia bowleyana
Sc19g0005120 Simmondsia chinensis
Sed0020990 Sechium edule
Sed0024198 Sechium edule
SEGI_14868 Sequoiadendron giganteum
SEGI_29823 Sequoiadendron giganteum
SEGI_37753 Sequoiadendron giganteum
SGA_v2.0_scaffold166G38354 Striga asiatica
SGA_v2.0_scaffold67G22647 Striga asiatica
SHI00272 Sapria himalayana
SMO361G0267 Selaginella moellendorffii
SMO361G0579 Selaginella moellendorffii
Solyc01g098100.2 Solanum lycopersicum
Sopen00g012890 Solanum pennellii
Sopen01g041670 Solanum pennellii
Sp7g14130 Schrenkiella parvula
TAR362G1261 Trochodendron aralioides
TAR633G1411 Trochodendron aralioides
THA.LOC104820258 Tarenaya hassleriana
Thecc.04G283400 Theobroma cacao
Thhalv10026330m.g Eutrema salsugineum
TPR.G12330 Trifolium pratense
TPR.G3221 Trifolium pratense
TPR.G35112 Trifolium pratense
TWI53G0131 Tripterygium wilfordii
unitig_88.g27714 Utricularia gibba
vmacro08137 Vaccinium macrocarpon
VMungo1383G0988 Vigna mungo
Zm00001eb257450 Zea mays

User provided reference genes

Program Settings