Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p25600 Brassica napus
Aa31LG3G15030 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.922 Anthoceros agrestis
Actinidia06976 Actinidia chinensis
Actinidia24469 Actinidia chinensis
Ah.06g194690 Amaranthus hybridus
AL6G22990 Arabidopsis lyrata
Aqoxy2G00403 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3AG2SN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.A6ZB5M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FI1QHS Arachis hypogaea
AT5G12200 Arabidopsis thaliana
ATR1096G054 Amborella trichopoda
Atru.chr3.3000 Acer truncatum
AUR62000207 Chenopodium quinoa
AUR62006553 Chenopodium quinoa
BcaNung06879 Brassica carinata
BolC9t59301H Brassica oleracea
BraA10t44627Z Brassica rapa
C09p64690 Brassica napus
CAN.G468.6 Capsicum annuum
CANSAT54G0522 Cannabis sativa
CANSAT80G2609 Cannabis sativa
CARHR200920 Cardamine hirsuta
Carub.0006s1070 Capsella rubella
Ca_06202_v3 Cicer arietinum L.
Ca_06205_v3 Cicer arietinum L.
CBR_g36941 Chara braunii
Cc00_g05700 Coffea canephora
Cc00_g05710 Coffea canephora
Cc00_g05720 Coffea canephora
Cc00_g05730 Coffea canephora
Cc00_g23240 Coffea canephora
CDE09G1005 Ceratophyllum demersum
Cfa009891 Carpinus fangiana
Cfa009892 Carpinus fangiana
Ciclev10014772m.g Citrus clementina
CiPaw.13G149200 Carya illinoinensis
CiPaw.14G111600 Carya illinoinensis
ClCG02G022760 Citrullus lanatus
COL.COLO4_24484 Corchorus olitorius
Cpa.g.sc34.179 Carica papaya
Cpa.g.sc34.180 Carica papaya
Cre02.g097000 Chlamydomonas reinhardtii
CsaV3_6G038890 Cucumis sativus L.
CSS0023003 Camellia sinensis var. sinensis
CSS0045717 Camellia sinensis var. sinensis
DCAR_023830 Daucus carota
Dinv15025 Davidia involucrata
Dinv36161 Davidia involucrata
Duzib168G2208 Durio zibethinus
ECA240G3738 Erigeron canadensis
EL10Ac4g10103 Beta vulgaris
Eucgr.J00682 Eucalyptus grandis
Eucgr.J00683 Eucalyptus grandis
FAN11G3899 Fragaria x ananassa
FAN21G2561 Fragaria x ananassa
FvH4_3g27770 Fragaria vesca
Glyma.02G278600 Glycine max
Glyma.03G080250 Glycine max
Glyma.08G177502 Glycine max
Glyma.14G036000 Glycine max
Glyma.15G055500 Glycine max
Gohir.A07G119100 Gossypium hirsutum
Gohir.A08G010200 Gossypium hirsutum
Gohir.D07G123400 Gossypium hirsutum
Gohir.D08G020300 Gossypium hirsutum
Gorai.001G133200 Gossypium raimondii
Gorai.004G014900 Gossypium raimondii
GSVIVG01019275001 Vitis vinifera
GSVIVG01037327001 Vitis vinifera
HanXRQChr13g0418801 Helianthus annuus
Haze_23254 Corylus avellana
Haze_26731 Corylus avellana
Haze_26934 Corylus avellana
Hma1.2p1_0460F.1_g157450 Hydrangea macrophylla
Hma1.2p1_0460F.1_g157460 Hydrangea macrophylla
HPP92_018205 Vanilla planifolia
Hund21970 Selenicereus undatus
Lalb_Chr17g0347771 Lupinus albus
Lj2A623G23 Lonicera japonica
Lj2C622G21 Lonicera japonica
LjContig00564g0001423 Lotus japonicus
LjContig00564g0010016 Lotus japonicus
LjContig00564g0013946 Lotus japonicus
Lsat_1_v5_gn_3_110020 Lactuca sativa
Manes.02G136500 Manihot esculenta
Mapoly0086s0068 Marchantia polymorpha
MBI13_g08984_MAGBIO Magnolia biondii
MBI13_g09228_MAGBIO Magnolia biondii
MCO02G098 Micromonas commoda
MD03G1164800 Malus domestica
Medtr5g089200 Medicago truncatula
Medtr5g089280 Medicago truncatula
Medtr7g062650 Medicago truncatula
MELO3C014554.2 Cucumis melo
MELO3C031085.2 Cucumis melo
Migut.D00673 Erythranthe guttata
MSTRG.18468 Avicennia marina
Nitab4.5_0006764g0060 Nicotiana tabacum
Nitab4.5_0009266g0060 Nicotiana tabacum
Nn7g36761 Nelumbo nucifera
Oeu013460.1 Olea europaea
Oeu038112.1 Olea europaea
Os01g0807900 Oryza sativa ssp. japonica
Peaxi162Scf00004g04314 Petunia axillaris
PGR119G0622 Punica granatum
PGR119G2369 Punica granatum
Phvul.006G204400 Phaseolus vulgaris
Phvul.008G202200 Phaseolus vulgaris
Potri.001G273400 Populus trichocarpa
Potri.009G067700 Populus trichocarpa
Pp3c24_19320 Physcomitrium patens
PRCOL_00004379 Prasinoderma coloniale
Prupe.4G264000 Prunus persica
Prupe.4G264100 Prunus persica
Psat0s4007g0120 Pisum sativum
Psat0s6670g0080 Pisum sativum
Psat2g020840 Pisum sativum
Psat2g075680 Pisum sativum
Psat6g063440 Pisum sativum
PSO211G0001 Papaver somniferum
PSO339G1418 Papaver somniferum
PSO384G0035 Papaver somniferum
QL01p016827 Quercus lobata
QL03p008751 Quercus lobata
QL05p016402 Quercus lobata
QL06p042225 Quercus lobata
RcHm_v2.0_Chr5g0050371 Rosa chinensis
Rhsim13G0207700 Rhododendron simsii
Rhsim13G0210300 Rhododendron simsii
Rhsim13G0210400 Rhododendron simsii
Sabra09G0050700 Salix brachista
SalBow6G0501 Salvia bowleyana
Sc09g0001080 Simmondsia chinensis
Sc09g0005690 Simmondsia chinensis
Sed0012563 Sechium edule
Sed0017489 Sechium edule
SEGI_39462 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04539 Striga asiatica
SMO351G0214 Selaginella moellendorffii
Solyc11g064920.2 Solanum lycopersicum
Sopen11g024720 Solanum pennellii
Sp6g31440 Schrenkiella parvula
TAR633G2420 Trochodendron aralioides
TAR636G0959 Trochodendron aralioides
TAR636G1014 Trochodendron aralioides
TAR636G2603 Trochodendron aralioides
THA.LOC104811202 Tarenaya hassleriana
Thecc.09G247500 Theobroma cacao
Thhalv10013212m.g Eutrema salsugineum
TPR.G16392 Trifolium pratense
TPR.G16403 Trifolium pratense
TPR.G16412 Trifolium pratense
TPR.G36034 Trifolium pratense
TWI31G0625 Tripterygium wilfordii
TWI79G1476 Tripterygium wilfordii
unitig_62.g23874 Utricularia gibba
vmacro04976 Vaccinium macrocarpon
vmacro04977 Vaccinium macrocarpon
VMungo0540G1052 Vigna mungo
VMungo0540G1132 Vigna mungo
VMungo0647G2253 Vigna mungo
Zm00001eb150370 Zea mays

User provided reference genes

Program Settings