Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p65570 Brassica napus
A09p17490 Brassica napus
Aa31LG2G9960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.633 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4714 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.587 Anthoceros agrestis
Actinidia15052 Actinidia chinensis
Ah.03g132780 Amaranthus hybridus
AL1G28650 Arabidopsis lyrata
AL2G16200 Arabidopsis lyrata
Aqoxy3G02910 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NH5LZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V3QVP0 Arachis hypogaea
AT1G60490 Arabidopsis thaliana
ATR0624G072 Amborella trichopoda
ATR0782G245 Amborella trichopoda
Atru.chr11.2050 Acer truncatum
Atru.chr11.2051 Acer truncatum
Atru.chr13.1904 Acer truncatum
AUR62005396 Chenopodium quinoa
AUR62014058 Chenopodium quinoa
BcaB07g31219 Brassica carinata
BcaC02g10625 Brassica carinata
BcaC04g22231 Brassica carinata
BcaC06g31812 Brassica carinata
BcaC07g40096 Brassica carinata
BolC4t24216H Brassica oleracea
BolC9t55085H Brassica oleracea
BraA09t37375Z Brassica rapa
C04p25930 Brassica napus
C04p25940 Brassica napus
C05p51030 Brassica napus
C05p51050 Brassica napus
C09p21800 Brassica napus
CAN.G1905.4 Capsicum annuum
CANSAT01G0446 Cannabis sativa
CARHR052540 Cardamine hirsuta
Carub.0002s0485 Capsella rubella
Ca_03146_v3 Cicer arietinum L.
CBR_g5616 Chara braunii
Cc11_g15270 Coffea canephora
CDE05G0167 Ceratophyllum demersum
Cfa009167 Carpinus fangiana
Cfa022200 Carpinus fangiana
Ciclev10030717m.g Citrus clementina
CiPaw.06G071000 Carya illinoinensis
ClCG08G018000 Citrullus lanatus
COL.COLO4_24195 Corchorus olitorius
Cpa.g.sc69.63 Carica papaya
Cre01.g035500 Chlamydomonas reinhardtii
CsaV3_2G024650 Cucumis sativus L.
CSS0036353 Camellia sinensis var. sinensis
DCAR_018086 Daucus carota
Dinv15280 Davidia involucrata
Dinv24834 Davidia involucrata
Duzib251G0882 Durio zibethinus
Duzib268G1271 Durio zibethinus
ECA246G3761 Erigeron canadensis
EL10Ac6g13693 Beta vulgaris
Eucgr.B01666 Eucalyptus grandis
Eucgr.B01668 Eucalyptus grandis
Eucgr.B01683 Eucalyptus grandis
Eucgr.H02571 Eucalyptus grandis
FAN07G1173 Fragaria x ananassa
FAN12G0317 Fragaria x ananassa
FAN17G1932 Fragaria x ananassa
FAN22G1014 Fragaria x ananassa
FvH4_4g34140 Fragaria vesca
Glyma.04G094500 Glycine max
Glyma.06G096300 Glycine max
Gohir.A01G161800 Gossypium hirsutum
Gohir.D01G149200 Gossypium hirsutum
Gorai.002G185300 Gossypium raimondii
GSVIVG01013767001 Vitis vinifera
HanXRQChr05g0137451 Helianthus annuus
HanXRQChr08g0213921 Helianthus annuus
HanXRQChr08g0217411 Helianthus annuus
HanXRQChr09g0267281 Helianthus annuus
HanXRQChr14g0446801 Helianthus annuus
HanXRQChr17g0539451 Helianthus annuus
Haze_12200 Corylus avellana
Hma1.2p1_0160F.1_g070980 Hydrangea macrophylla
Hma1.2p1_0536F.1_g173910 Hydrangea macrophylla
HPP92_021387 Vanilla planifolia
HPP92_021388 Vanilla planifolia
Hund25360 Selenicereus undatus
Lalb_Chr05g0216791 Lupinus albus
Lalb_Chr09g0326321 Lupinus albus
Lj2g0023088 Lotus japonicus
Lj6A807T88 Lonicera japonica
Lsat_1_v5_gn_4_161060 Lactuca sativa
Manes.12G027200 Manihot esculenta
Mapoly0003s0185 Marchantia polymorpha
MapolyY_A0049 Marchantia polymorpha
MBI16_g27084_MAGBIO Magnolia biondii
MCO10G171 Micromonas commoda
MD13G1093900 Malus domestica
MD16G1095200 Malus domestica
Medtr5g034120 Medicago truncatula
MELO3C010667.2 Cucumis melo
Migut.M00070 Erythranthe guttata
MSTRG.6617 Avicennia marina
Nitab4.5_0000147g0050 Nicotiana tabacum
Nitab4.5_0001663g0240 Nicotiana tabacum
Nitab4.5_0001663g0250 Nicotiana tabacum
Nn2g14843 Nelumbo nucifera
Oeu022146.1 Olea europaea
Oeu036965.1 Olea europaea
Oeu054064.1 Olea europaea
Os05g0180600 Oryza sativa ssp. japonica
Os08g0307400 Oryza sativa ssp. japonica
Peaxi162Scf01286g00001 Petunia axillaris
PGR119G1808 Punica granatum
Phvul.002G070100 Phaseolus vulgaris
Potri.012G075100 Populus trichocarpa
Pp3c10_8910 Physcomitrium patens
PRCOL_00000780 Prasinoderma coloniale
PRCOL_00005596 Prasinoderma coloniale
Prupe.1G251400 Prunus persica
Psat2g104920 Pisum sativum
PSO675G7676 Papaver somniferum
QL03p059677 Quercus lobata
RcHm_v2.0_Chr4g0443651 Rosa chinensis
Rhsim12G0115800 Rhododendron simsii
Sabra12G0053500 Salix brachista
Sabra15G0094700 Salix brachista
SalBow8G4047 Salvia bowleyana
Sc04g0009240 Simmondsia chinensis
Sed0015591 Sechium edule
SEGI_07357 Sequoiadendron giganteum
SEGI_15159 Sequoiadendron giganteum
SEGI_20330 Sequoiadendron giganteum
SEGI_22699 Sequoiadendron giganteum
SEGI_24951 Sequoiadendron giganteum
SEGI_28362 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39704 Striga asiatica
SGA_v2.0_scaffold73G24480 Striga asiatica
SGA_v2.0_scaffold74G24586 Striga asiatica
SHI17516 Sapria himalayana
SHI17519 Sapria himalayana
SHI17520 Sapria himalayana
SHI17525 Sapria himalayana
SHI17526 Sapria himalayana
SHI17532 Sapria himalayana
SMO134G0165 Selaginella moellendorffii
SMO165G0116 Selaginella moellendorffii
SMO228G0017 Selaginella moellendorffii
Solyc04g015350.3 Solanum lycopersicum
Sopen04g007420 Solanum pennellii
Sp2g04240 Schrenkiella parvula
TAR371G0394 Trochodendron aralioides
TAR622G0032 Trochodendron aralioides
TAR622G0596 Trochodendron aralioides
THA.LOC104809607 Tarenaya hassleriana
THA.LOC104823649 Tarenaya hassleriana
Thecc.02G252600 Theobroma cacao
Thhalv10023282m.g Eutrema salsugineum
TPR.G21086 Trifolium pratense
TPR.G40832 Trifolium pratense
TWI36G0660 Tripterygium wilfordii
TWI75G1525 Tripterygium wilfordii
vmacro16235 Vaccinium macrocarpon
VMungo1215G0144 Vigna mungo
Zm00001eb178330 Zea mays

User provided reference genes

Program Settings