Gene: Sopen04g007420
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g007420
- Transcript Identifier Sopen04g007420.1
- Gene Type Coding gene
- Location Spenn-ch04 : 5755876-5767060 : positive
Gene Family Information
- ID HOM05D004343
- #Genes/#Species 164/98
- Phylogenetic origin
- ID ORTHO05D005695
- #Genes/#Species 153/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen04g007420.1
Descriptions
- Description Phosphatidylinositol 3-kinase, root isoform (EC 2.7.1.137) (PI3-kinase) (PtdIns-3-kinase) (PI3K) (SPI3K-5) - Glycine max (Soybean), Encodes a phosphatidylinositol 3-kinase that is expressed in most plant tissues. Defects in VPS34 affect a number of cellular processes. Loss of function mutations are not transmitted through the male gametophyte due to defects in microgametogenesis therefore it is difficult to assess the effects of loss of VPS34 function in the whole plant. Involved in salt-stress responses. | vacuolar protein sorting 34 (VPS34) | FUNCTIONS IN: 1-phosphatidylinositol-3-kinase activity, inositol or phosphatidylinositol kinase activity, binding, phosphotransferase activity, alcohol group as acceptor | INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to salt stress, endocytosis, N-terminal protein myristoylation, microgametogenesis | LOCATED IN: phosphoinositide 3-kinase complex | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Phosphatidylinositol 3-/4-kinase, catalytic , Phosphoinositide 3-kinase, accessory (PIK) domain , Phosphoinositide 3-kinase, C2 , C2 calcium/lipid-binding domain, CaLB , Protein kinase-like domain , Phosphatidylinositol Kinase , Phosphatidylinositol 3-kinase, Vps34 type , Armadillo-type fold , Phosphatidylinositol 3/4-kinase, conserved site | BEST Arabidopsis thaliana protein match is: Phosphatidylinositol 3- and 4-kinase family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0046854 | IEA | InterPro | phosphatidylinositol phosphate biosynthetic process | |
GO:0048015 | IEA | InterPro | phosphatidylinositol-mediated signaling | |
GO:0072593 | ISO | PLAZA Integrative Orthology | reactive oxygen species metabolic process | AT1G60490 |
GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT1G60490 |
GO:0055046 | ISO | PLAZA Integrative Orthology | microgametogenesis | AT1G60490 |
GO:0006897 | ISO | PLAZA Integrative Orthology | endocytosis | AT1G60490 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0016303 | IEA | InterPro | 1-phosphatidylinositol-3-kinase activity | |
GO:0016301 | IEA | InterPro | kinase activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G60490 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR008290 | Phosphatidylinositol 3-kinase, Vps34 type |
IPR002420 | C2 phosphatidylinositol 3-kinase-type domain |
IPR035892 | C2 domain superfamily |
IPR001263 | Phosphoinositide 3-kinase, accessory (PIK) domain |
IPR016024 | Armadillo-type fold |
IPR000403 | Phosphatidylinositol 3-/4-kinase, catalytic domain |
IPR011009 | Protein kinase-like domain superfamily |
IPR011162 | MHC classes I/II-like antigen recognition protein |
IPR036940 | Phosphatidylinositol 3-/4-kinase, catalytic domain superfamily |
IPR015433 | Phosphatidylinositol kinase |
IPR042236 | Phosphoinositide 3-kinase, accessory (PIK) domain superfamily |
Mapman id | Description |
---|---|
19.3.2.1 | Protein homeostasis.autophagy.nucleation complexes.phosphatidylinositol 3-kinase component VPS34/PI3K |
27.5.1.4.1 | Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.phosphatidylinositol kinase activities.phosphatidylinositol 3-kinase (VPS34) |