Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11990 Brassica napus
A08p14740 Brassica napus
Aa31LG9G8550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.908 Anthoceros agrestis
Actinidia34783 Actinidia chinensis
Ah.07g207810 Amaranthus hybridus
AL1G32730 Arabidopsis lyrata
AL7G33620 Arabidopsis lyrata
Aqoxy4G00695 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.22GDSE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VCV969 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1Y39Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W2JFNW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZMN623 Arachis hypogaea
AT1G20000 Arabidopsis thaliana
AT4G20280 Arabidopsis thaliana
ATR0737G165 Amborella trichopoda
AUR62002184 Chenopodium quinoa
AUR62015527 Chenopodium quinoa
BcaB03g11664 Brassica carinata
BcaB03g11665 Brassica carinata
BcaB03g11666 Brassica carinata
BcaB04g18416 Brassica carinata
BcaB04g20244 Brassica carinata
BcaB04g20257 Brassica carinata
BcaB04g20259 Brassica carinata
BcaB08g34314 Brassica carinata
BcaC01g00664 Brassica carinata
BcaC09g49417 Brassica carinata
BcaC09g51324 Brassica carinata
BcaNung03718 Brassica carinata
BolC1t01390H Brassica oleracea
BolC1t03652H Brassica oleracea
BraA01t01141Z Brassica rapa
BraA08t33460Z Brassica rapa
C01p14250 Brassica napus
CAN.G1144.22 Capsicum annuum
CAN.G359.8 Capsicum annuum
CANSAT78G0611 Cannabis sativa
CARHR227110 Cardamine hirsuta
Carub.0007s2089 Capsella rubella
Ca_26283_v3 Cicer arietinum L.
CBR_g22400 Chara braunii
Cc09_g04540 Coffea canephora
CDE04G3252 Ceratophyllum demersum
Cfa001170 Carpinus fangiana
Cfa024000 Carpinus fangiana
Ciclev10016661m.g Citrus clementina
CiPaw.02G184500 Carya illinoinensis
CiPaw.10G108700 Carya illinoinensis
ClCG00G000170 Citrullus lanatus
ClCG10G003420 Citrullus lanatus
COL.COLO4_10402 Corchorus olitorius
Cpa.g.c30482 Carica papaya
Cre01.g011350 Chlamydomonas reinhardtii
CsaV3_3G003450 Cucumis sativus L.
CSS0011039 Camellia sinensis var. sinensis
CSS0011539 Camellia sinensis var. sinensis
CSS0032338 Camellia sinensis var. sinensis
DCAR_007769 Daucus carota
Dinv05280 Davidia involucrata
Dinv14194 Davidia involucrata
Dinv17497 Davidia involucrata
Duzib150G1434 Durio zibethinus
ECA234G2847 Erigeron canadensis
EL10Ac3g05823 Beta vulgaris
Eucgr.G01564 Eucalyptus grandis
FAN07G2754 Fragaria x ananassa
FAN11G3831 Fragaria x ananassa
FAN16G0631 Fragaria x ananassa
FAN21G2305 Fragaria x ananassa
FAN25G3107 Fragaria x ananassa
FvH4_3g13420 Fragaria vesca
Glyma.03G001900 Glycine max
Gohir.A10G168600 Gossypium hirsutum
Gohir.A13G214400 Gossypium hirsutum
Gohir.D10G174800 Gossypium hirsutum
Gohir.D13G218100 Gossypium hirsutum
Gorai.011G195600 Gossypium raimondii
Gorai.013G248900 Gossypium raimondii
GSVIVG01038073001 Vitis vinifera
HanXRQChr12g0384191 Helianthus annuus
HanXRQChr13g0422931 Helianthus annuus
Haze_05182 Corylus avellana
Hma1.2p1_0701F.1_g205915 Hydrangea macrophylla
HPP92_006338 Vanilla planifolia
HPP92_027866 Vanilla planifolia
Hund04610 Selenicereus undatus
Hund11810 Selenicereus undatus
Lalb_Chr06g0163081 Lupinus albus
Lj1A1153T31 Lonicera japonica
Lj3g0018794 Lotus japonicus
Lj4g0017726 Lotus japonicus
Lj7A164T18 Lonicera japonica
Lsat_1_v5_gn_1_1241 Lactuca sativa
Lsat_1_v5_gn_1_77761 Lactuca sativa
Lsat_1_v5_gn_3_129240 Lactuca sativa
Lsat_1_v5_gn_4_45480 Lactuca sativa
Manes.16G060700 Manihot esculenta
Mapoly0006s0068 Marchantia polymorpha
MBI06_g30999_MAGBIO Magnolia biondii
MCO01G288 Micromonas commoda
MD10G1223700 Malus domestica
Medtr0085s0030 Medicago truncatula
Medtr1g047200 Medicago truncatula
MELO3C014011.2 Cucumis melo
MSTRG.22399 Avicennia marina
Nitab4.5_0000414g0070 Nicotiana tabacum
Nitab4.5_0000422g0150 Nicotiana tabacum
Nitab4.5_0012569g0030 Nicotiana tabacum
Nitab4.5_0015757g0010 Nicotiana tabacum
Nitab4.5_0015757g0020 Nicotiana tabacum
Nn1g09858 Nelumbo nucifera
Oeu020261.1 Olea europaea
Oeu020262.1 Olea europaea
Oeu062532.1 Olea europaea
Os01g0680400 Oryza sativa ssp. japonica
Peaxi162Scf00119g01515 Petunia axillaris
Peaxi162Scf00188g00814 Petunia axillaris
PGR083G1473 Punica granatum
PGSC0003DMG400019653 Solanum tuberosum
Phvul.010G058500 Phaseolus vulgaris
Potri.001G073500 Populus trichocarpa
Potri.003G157401 Populus trichocarpa
Potri.003G157450 Populus trichocarpa
Pp3c14_26520 Physcomitrium patens
PRCOL_00001421 Prasinoderma coloniale
Prupe.4G121600 Prunus persica
Psat6g047640 Pisum sativum
PSO017G7392 Papaver somniferum
PSO210G4911 Papaver somniferum
QL08p059659 Quercus lobata
QL11p010678 Quercus lobata
RcHm_v2.0_Chr5g0022151 Rosa chinensis
Rhsim13G0136700 Rhododendron simsii
Sabra01G0051800 Salix brachista
SalBow5G0282 Salvia bowleyana
Sc19g0001960 Simmondsia chinensis
Sc19g0001970 Simmondsia chinensis
Sed0011196 Sechium edule
SEGI_17825 Sequoiadendron giganteum
SGA_v2.0_scaffold28G11752 Striga asiatica
SHI16737 Sapria himalayana
SMO115G0310 Selaginella moellendorffii
Solyc05g010570.3 Solanum lycopersicum
Solyc05g018120.2 Solanum lycopersicum
Sopen05g006350 Solanum pennellii
Sp7g18640 Schrenkiella parvula
TAR626G1254 Trochodendron aralioides
THA.LOC104806232 Tarenaya hassleriana
THA.LOC104812926 Tarenaya hassleriana
Thecc.09G217200 Theobroma cacao
Thhalv10026240m.g Eutrema salsugineum
TPR.G20312 Trifolium pratense
TPR.G20753 Trifolium pratense
TPR.G30192 Trifolium pratense
TPR.G36214 Trifolium pratense
TWI15G0268 Tripterygium wilfordii
TWI63G1746 Tripterygium wilfordii
unitig_21.g20916 Utricularia gibba
vmacro03576 Vaccinium macrocarpon
VMungo0331G0448 Vigna mungo
Zm00001eb156710 Zea mays
Zm00001eb360430 Zea mays

User provided reference genes

Program Settings