Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p40370 Brassica napus
A02p40430 Brassica napus
A02p40590 Brassica napus
A06p35170 Brassica napus
Aa31LG11G3630 Aethionema arabicum
Aa31LG11G3970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1567 Anthoceros agrestis
Actinidia08674 Actinidia chinensis
Actinidia34248 Actinidia chinensis
Actinidia34249 Actinidia chinensis
Ah.01g018970 Amaranthus hybridus
AL6G35880 Arabidopsis lyrata
Aqoxy5G04259 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7A8JPA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F5KWPZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SMAV3X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UK8Y7I Arachis hypogaea
AT5G24350 Arabidopsis thaliana
ATR0697G222 Amborella trichopoda
ATR0697G293 Amborella trichopoda
Atru.chr12.2311 Acer truncatum
AUR62010404 Chenopodium quinoa
AUR62016813 Chenopodium quinoa
BcaC03g17980 Brassica carinata
BcaNung01227 Brassica carinata
BcaNung02039 Brassica carinata
BolC2t12087H Brassica oleracea
BolC7t44866H Brassica oleracea
BraA06t26437Z Brassica rapa
C07p43390 Brassica napus
CAN.G3762.1 Capsicum annuum
CAN.G481.55 Capsicum annuum
CAN.G481.56 Capsicum annuum
CAN.G481.57 Capsicum annuum
CAN.G481.58 Capsicum annuum
CAN.G481.59 Capsicum annuum
CAN.G481.60 Capsicum annuum
CANSAT21G1061 Cannabis sativa
CARHR189090 Cardamine hirsuta
Carub.0006s2217 Capsella rubella
Carub.0006s2218 Capsella rubella
Ca_16734_v3 Cicer arietinum L.
CBR_g48777 Chara braunii
Cc02_g01170 Coffea canephora
CDE02G3740 Ceratophyllum demersum
Cfa016195 Carpinus fangiana
Ciclev10000006m.g Citrus clementina
CiPaw.05G200800 Carya illinoinensis
ClCG03G011440 Citrullus lanatus
COL.COLO4_16822 Corchorus olitorius
Cpa.g.c29767.1 Carica papaya
Cpa.g.c45444 Carica papaya
Cre09.g415400 Chlamydomonas reinhardtii
CsaV3_1G044960 Cucumis sativus L.
CSS0015753 Camellia sinensis var. sinensis
CSS0025528 Camellia sinensis var. sinensis
CSS0041108 Camellia sinensis var. sinensis
CSS0044449 Camellia sinensis var. sinensis
DCAR_020346 Daucus carota
Dinv32109 Davidia involucrata
Duzib068G0008 Durio zibethinus
ECA232G2446 Erigeron canadensis
EL10Ac9g21652 Beta vulgaris
Eucgr.D00250 Eucalyptus grandis
Eucgr.D00251 Eucalyptus grandis
FAN01G1860 Fragaria x ananassa
FAN03G1314 Fragaria x ananassa
FAN06G4186 Fragaria x ananassa
FAN10G0319 Fragaria x ananassa
FAN10G1078 Fragaria x ananassa
FAN20G1934 Fragaria x ananassa
FvH4_7g32380 Fragaria vesca
Glyma.04G232700 Glycine max
Glyma.06G132300 Glycine max
Gohir.A09G185800 Gossypium hirsutum
Gohir.A12G247800 Gossypium hirsutum
Gohir.D09G180800 Gossypium hirsutum
Gohir.D12G248500 Gossypium hirsutum
Gorai.006G202800 Gossypium raimondii
Gorai.008G266500 Gossypium raimondii
GSVIVG01038603001 Vitis vinifera
HanXRQChr04g0107121 Helianthus annuus
Haze_00260 Corylus avellana
HPP92_002817 Vanilla planifolia
Hund21026 Selenicereus undatus
Lalb_Chr08g0240011 Lupinus albus
Lj1C1024G7 Lonicera japonica
Lj1g0003347 Lotus japonicus
Lj4g0026522 Lotus japonicus
Lsat_1_v5_gn_9_49400 Lactuca sativa
Manes.01G037200 Manihot esculenta
Mapoly0143s0007 Marchantia polymorpha
MBI06_g06689_MAGBIO Magnolia biondii
MCO09G360 Micromonas commoda
MD01G1225300 Malus domestica
MD07G1295800 Malus domestica
Medtr3g091940 Medicago truncatula
MELO3C010103.2 Cucumis melo
Migut.F00177 Erythranthe guttata
MSTRG.27005 Avicennia marina
Nitab4.5_0004178g0010 Nicotiana tabacum
Nitab4.5_0004178g0020 Nicotiana tabacum
Nitab4.5_0004178g0030 Nicotiana tabacum
Nitab4.5_0004178g0040 Nicotiana tabacum
Nitab4.5_0004178g0050 Nicotiana tabacum
Nitab4.5_0004178g0060 Nicotiana tabacum
Nitab4.5_0004178g0070 Nicotiana tabacum
Nitab4.5_0008197g0020 Nicotiana tabacum
Nitab4.5_0010367g0010 Nicotiana tabacum
Nn7g38041 Nelumbo nucifera
Oeu001936.1 Olea europaea
Oeu001937.1 Olea europaea
Oeu049088.1 Olea europaea
Os12g0233600 Oryza sativa ssp. japonica
Peaxi162Scf00740g00426 Petunia axillaris
PGR142G3828 Punica granatum
Phvul.009G048100 Phaseolus vulgaris
Potri.012G020000 Populus trichocarpa
Potri.015G008500 Populus trichocarpa
Pp3c1_3140 Physcomitrium patens
Prupe.2G315300 Prunus persica
Psat0s2221g0080 Pisum sativum
Psat0s3076g0080 Pisum sativum
Psat1g100720 Pisum sativum
Psat1g135480 Pisum sativum
Psat1g176920 Pisum sativum
Psat2g097720 Pisum sativum
Psat4g066600 Pisum sativum
Psat4g068800 Pisum sativum
Psat5g074840 Pisum sativum
Psat6g091080 Pisum sativum
PSO063G3257 Papaver somniferum
QL11p010725 Quercus lobata
RcHm_v2.0_Chr1g0381961 Rosa chinensis
Rhsim03G0212200 Rhododendron simsii
Sabra12G0012900 Salix brachista
Sabra15G0006500 Salix brachista
SalBow4G2088 Salvia bowleyana
Sc19g0000760 Simmondsia chinensis
Sed0018682 Sechium edule
SEGI_07013 Sequoiadendron giganteum
SEGI_10720 Sequoiadendron giganteum
SEGI_24760 Sequoiadendron giganteum
SEGI_39314 Sequoiadendron giganteum
SGA_v2.0_scaffold18G08437 Striga asiatica
SHI08278 Sapria himalayana
SHI08279 Sapria himalayana
SHI08285 Sapria himalayana
SHI08286 Sapria himalayana
SHI08287 Sapria himalayana
SMO356G0059 Selaginella moellendorffii
Solyc03g082680.4 Solanum lycopersicum
Sopen03g022440 Solanum pennellii
Sp2g22970 Schrenkiella parvula
TAR633G0098 Trochodendron aralioides
THA.LOC104798907 Tarenaya hassleriana
Thecc.03G204400 Theobroma cacao
Thhalv10003502m.g Eutrema salsugineum
TPR.G33633 Trifolium pratense
TWI39G1232 Tripterygium wilfordii
unitig_0.g2452 Utricularia gibba
vmacro06413 Vaccinium macrocarpon
VMungo1309G1648 Vigna mungo
VMungo1309G3147 Vigna mungo
Zm00001eb359130 Zea mays

User provided reference genes

Program Settings