Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22410 Brassica napus
A04p30150 Brassica napus
A05p06430 Brassica napus
Aa31LG5G19620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2489 Anthoceros agrestis
Actinidia13922 Actinidia chinensis
Actinidia29683 Actinidia chinensis
Ah.08g220830 Amaranthus hybridus
Ah.15g099780 Amaranthus hybridus
AL4G37580 Arabidopsis lyrata
AL624U10010 Arabidopsis lyrata
Aqoxy2G03884 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1H7P3M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3S5W1 Arachis hypogaea
AT2G39990 Arabidopsis thaliana
ATR1127G008 Amborella trichopoda
Atru.chr12.232 Acer truncatum
AUR62001677 Chenopodium quinoa
AUR62020103 Chenopodium quinoa
BcaB01g03583 Brassica carinata
BcaB02g09062 Brassica carinata
BcaC01g05449 Brassica carinata
BolC3t15043H Brassica oleracea
BolC4t22368H Brassica oleracea
BraA03t11469Z Brassica rapa
BraA04t18494Z Brassica rapa
BraA05t19611Z Brassica rapa
C03p26570 Brassica napus
C04p07500 Brassica napus
CAN.G255.4 Capsicum annuum
CANSAT56G2826 Cannabis sativa
CARHR134940 Cardamine hirsuta
Carub.0004s2213 Capsella rubella
Ca_05939_v3 Cicer arietinum L.
Ca_17153_v3 Cicer arietinum L.
CBR_g51981 Chara braunii
Cc02_g06830 Coffea canephora
CDE02G2318 Ceratophyllum demersum
CDE04G2342 Ceratophyllum demersum
CDE08G1456 Ceratophyllum demersum
Cfa001356 Carpinus fangiana
Cfa022414 Carpinus fangiana
Ciclev10032098m.g Citrus clementina
CiPaw.01G296400 Carya illinoinensis
CiPaw.02G190500 Carya illinoinensis
ClCG11G006300 Citrullus lanatus
COL.COLO4_25650 Corchorus olitorius
COL.COLO4_31614 Corchorus olitorius
Cpa.g.sc19.202 Carica papaya
Cre16.g654500 Chlamydomonas reinhardtii
CsaV3_6G001680 Cucumis sativus L.
CSS0043457 Camellia sinensis var. sinensis
DCAR_032139 Daucus carota
Dinv13745 Davidia involucrata
Dinv20962 Davidia involucrata
Dinv20981 Davidia involucrata
Dinv34417 Davidia involucrata
Duzib106G1285 Durio zibethinus
Duzib114G0905 Durio zibethinus
Duzib128G0078 Durio zibethinus
ECA232G0842 Erigeron canadensis
ECA238G0079 Erigeron canadensis
EL10Ac7g16132 Beta vulgaris
EL10Ac7g16137 Beta vulgaris
Eucgr.B01698 Eucalyptus grandis
Eucgr.B02106 Eucalyptus grandis
FAN01G1285 Fragaria x ananassa
FAN03G2018 Fragaria x ananassa
FAN06G4692 Fragaria x ananassa
FAN10G3467 Fragaria x ananassa
FvH4_7g24110 Fragaria vesca
Glyma.02G254900 Glycine max
Glyma.11G227900 Glycine max
Glyma.14G061600 Glycine max
Glyma.18G029500 Glycine max
Gohir.A10G233100 Gossypium hirsutum
Gohir.A13G016400 Gossypium hirsutum
Gohir.D10G245400 Gossypium hirsutum
Gohir.D13G017500 Gossypium hirsutum
Gorai.011G283100 Gossypium raimondii
Gorai.013G019400 Gossypium raimondii
GSVIVG01016359001 Vitis vinifera
HanXRQChr07g0202471 Helianthus annuus
HanXRQChr14g0460011 Helianthus annuus
Haze_17192 Corylus avellana
Hma1.2p1_1409F.1_g281690 Hydrangea macrophylla
Hma1.2p1_2079F.1_g313450 Hydrangea macrophylla
HPP92_018195 Vanilla planifolia
Hund04884 Selenicereus undatus
Hund18856 Selenicereus undatus
Lalb_Chr15g0084221 Lupinus albus
Lalb_Chr20g0116571 Lupinus albus
Lj6g0024956 Lotus japonicus
Lj8C71T5 Lonicera japonica
Lsat_1_v5_gn_2_121560 Lactuca sativa
Manes.07G126300 Manihot esculenta
Manes.07G126500 Manihot esculenta
Manes.10G016633 Manihot esculenta
Mapoly0084s0049 Marchantia polymorpha
MBI06_g08188_MAGBIO Magnolia biondii
MCO13G167 Micromonas commoda
MD01G1148100 Malus domestica
MD07G1215300 Malus domestica
Medtr3g070190 Medicago truncatula
Medtr5g082000 Medicago truncatula
Medtr5g082010 Medicago truncatula
MELO3C008285.2 Cucumis melo
Migut.F00700 Erythranthe guttata
MSTRG.8969 Avicennia marina
Nitab4.5_0000051g0230 Nicotiana tabacum
Nitab4.5_0002100g0070 Nicotiana tabacum
Nitab4.5_0004338g0100 Nicotiana tabacum
Nitab4.5_0004737g0040 Nicotiana tabacum
Nn1g00865 Nelumbo nucifera
Nn2g14829 Nelumbo nucifera
Oeu036042.1 Olea europaea
Oeu038001.1 Olea europaea
Oeu039013.1 Olea europaea
Os05g0104800 Oryza sativa ssp. japonica
Peaxi162Scf00957g00227 Petunia axillaris
PGR044G0899 Punica granatum
PGSC0003DMG400027182 Solanum tuberosum
PGSC0003DMG400027787 Solanum tuberosum
Phvul.001G241100 Phaseolus vulgaris
Potri.008G065500 Populus trichocarpa
Potri.010G192000 Populus trichocarpa
Pp3c11_20930 Physcomitrium patens
Pp3c7_5560 Physcomitrium patens
PRCOL_00004823 Prasinoderma coloniale
Prupe.2G247200 Prunus persica
Psat2g034600 Pisum sativum
Psat5g126960 Pisum sativum
PSO339G4101 Papaver somniferum
PSO801G0608 Papaver somniferum
RcHm_v2.0_Chr1g0369531 Rosa chinensis
Rhsim09G0172500 Rhododendron simsii
Sabra10G0147700 Salix brachista
SalBow6G1306 Salvia bowleyana
Sc12g0000910 Simmondsia chinensis
Sed0000856 Sechium edule
Sed0009807 Sechium edule
SEGI_23595 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16706 Striga asiatica
SGA_v2.0_scaffold60G21025 Striga asiatica
SHI03506 Sapria himalayana
SMO358G0553 Selaginella moellendorffii
Solyc05g052690.4 Solanum lycopersicum
Solyc11g013440.2 Solanum lycopersicum
Sopen05g031210 Solanum pennellii
Sopen11g008430 Solanum pennellii
Sp4g22300 Schrenkiella parvula
TAR369G0377 Trochodendron aralioides
TAR623G1287 Trochodendron aralioides
THA.LOC104809927 Tarenaya hassleriana
THA.LOC104810078 Tarenaya hassleriana
Thecc.04G298200 Theobroma cacao
Thecc.10G025300 Theobroma cacao
Thhalv10016933m.g Eutrema salsugineum
TPR.G16290 Trifolium pratense
TPR.G19852 Trifolium pratense
TWI53G0350 Tripterygium wilfordii
TWI73G0284 Tripterygium wilfordii
VMungo1383G3192 Vigna mungo
Zm00001eb267470 Zea mays
Zm00001eb356180 Zea mays

User provided reference genes

Program Settings