Gene: PGSC0003DMG400027787
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400027787
- Transcript Identifier PGSC0003DMT400071416
- Gene Type Coding gene
- Location ST4.03ch11 : 9772001-9781509 : negative
Gene Family Information
- ID HOM05D004319
- #Genes/#Species 165/97
- Phylogenetic origin
- ID ORTHO05D005433
- #Genes/#Species 158/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37465407
- id PGSC0003DMG400027787.v4.03
- uniprot M1CNR2
Descriptions
- Description Eukaryotic translation initiation factor 3f, eif3f
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009744 | ISO | PLAZA Integrative Orthology | response to sucrose | AT2G39990 |
| GO:0009846 | ISO | PLAZA Integrative Orthology | pollen germination | AT2G39990 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT2G39990 |
| GO:0006413 | IBA IEA | GOA Database | translational initiation | |
| GO:0006413 | IEA | InterPro | translational initiation | |
| GO:0006412 | IEA | GOA Database | translation | |
| GO:0006508 | IEA | GOA Database | proteolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070122 | IEA | GOA Database | isopeptidase activity | |
| GO:0070122 | IEA | InterPro | isopeptidase activity | |
| GO:0031369 | IBA IEA | GOA Database | translation initiation factor binding | |
| GO:0031369 | IEA | InterPro | translation initiation factor binding | |
| GO:0003743 | IBA IEA | GOA Database | translation initiation factor activity | |
| GO:0003743 | IEA | InterPro | translation initiation factor activity | |
| GO:0008237 | IEA | GOA Database | metallopeptidase activity | |
| GO:0008237 | IEA | InterPro | metallopeptidase activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G39990 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G39990 |
| GO:0071541 | IBA | GOA Database | eukaryotic translation initiation factor 3 complex, eIF3m | |
| GO:0005852 | IEA | GOA Database | eukaryotic translation initiation factor 3 complex | |
| GO:0005852 | IEA | InterPro | eukaryotic translation initiation factor 3 complex | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.4.1.3.6 | Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3f |