Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p31600 Brassica napus
A09p08860 Brassica napus
Aa31LG1G17120 Aethionema arabicum
Actinidia33578 Actinidia chinensis
Actinidia35263 Actinidia chinensis
Ah.02g125940 Amaranthus hybridus
Ah.05g168370 Amaranthus hybridus
AL2G19240 Arabidopsis lyrata
AL6G20330 Arabidopsis lyrata
AL8G42280 Arabidopsis lyrata
Aqoxy6G00452 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8U6WSJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IW8T8H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9CCL6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QW6G0A Arachis hypogaea
AT5G09910 Arabidopsis thaliana
AT5G64813 Arabidopsis thaliana
ATR1120G075 Amborella trichopoda
Atru.chr4.2810 Acer truncatum
AUR62003298 Chenopodium quinoa
AUR62026610 Chenopodium quinoa
AUR62027164 Chenopodium quinoa
AUR62034924 Chenopodium quinoa
AUR62039713 Chenopodium quinoa
BcaB02g09831 Brassica carinata
BcaB04g19996 Brassica carinata
BcaC01g02714 Brassica carinata
BcaC04g23277 Brassica carinata
BolC3t18396H Brassica oleracea
BolC9t53928H Brassica oleracea
BraA06t26097Z Brassica rapa
BraA09t36537Z Brassica rapa
C03p61360 Brassica napus
C09p10280 Brassica napus
CAN.G241.17 Capsicum annuum
CANSAT01G1092 Cannabis sativa
CARHR203420 Cardamine hirsuta
CARHR203430 Cardamine hirsuta
CARHR278810 Cardamine hirsuta
Carub.0006s0835 Capsella rubella
Carub.0008s2563 Capsella rubella
Ca_17692_v3 Cicer arietinum L.
Cc11_g00180 Coffea canephora
CDE05G1892 Ceratophyllum demersum
CDE11G1206 Ceratophyllum demersum
CDE11G1235 Ceratophyllum demersum
Cfa002764 Carpinus fangiana
Ciclev10026038m.g Citrus clementina
CiPaw.03G133600 Carya illinoinensis
CiPaw.04G091000 Carya illinoinensis
ClCG02G000980 Citrullus lanatus
COL.COLO4_10999 Corchorus olitorius
Cpa.g.sc191.9 Carica papaya
CsaV3_2G017700 Cucumis sativus L.
DCAR_000764 Daucus carota
DCAR_001376 Daucus carota
Dinv19475 Davidia involucrata
Dinv42682 Davidia involucrata
Duzib147G1288 Durio zibethinus
Duzib187G1335 Durio zibethinus
Duzib264G0693 Durio zibethinus
ECA233G0885 Erigeron canadensis
ECA240G0243 Erigeron canadensis
EL10Ac1g01634 Beta vulgaris
EL10Ac6g14771 Beta vulgaris
Eucgr.H04871 Eucalyptus grandis
FAN19G1483 Fragaria x ananassa
FAN23G2660 Fragaria x ananassa
FAN26G1550 Fragaria x ananassa
FAN28G2916 Fragaria x ananassa
FvH4_1g22810 Fragaria vesca
Glyma.05G184400 Glycine max
Glyma.08G142300 Glycine max
Glyma.17G174700 Glycine max
Gohir.A11G053900 Gossypium hirsutum
Gohir.A11G197500 Gossypium hirsutum
Gohir.D11G057400 Gossypium hirsutum
Gohir.D11G232000 Gossypium hirsutum
Gorai.007G062600 Gossypium raimondii
Gorai.007G245100 Gossypium raimondii
GSVIVG01013682001 Vitis vinifera
GSVIVG01022244001 Vitis vinifera
HanXRQChr02g0047931 Helianthus annuus
HanXRQChr03g0078021 Helianthus annuus
Haze_25055 Corylus avellana
Hma1.2p1_0375F.1_g138790 Hydrangea macrophylla
HPP92_009117 Vanilla planifolia
HPP92_021785 Vanilla planifolia
Hund03530 Selenicereus undatus
Lalb_Chr11g0068101 Lupinus albus
Lalb_Chr12g0203501 Lupinus albus
Lalb_Chr13g0296231 Lupinus albus
Lj2C567G4 Lonicera japonica
Lj4A864T19 Lonicera japonica
Lj4g0017689 Lotus japonicus
Lsat_1_v5_gn_6_7740 Lactuca sativa
Manes.12G143400 Manihot esculenta
Mapoly0088s0081 Marchantia polymorpha
MBI01_g44371_MAGBIO Magnolia biondii
MCO10G219 Micromonas commoda
MD08G1250200 Malus domestica
MD15G1445400 Malus domestica
Medtr8g091980 Medicago truncatula
MELO3C020962.2 Cucumis melo
Migut.H02443 Erythranthe guttata
MSTRG.23310 Avicennia marina
MSTRG.2526 Avicennia marina
Nitab4.5_0000184g0250 Nicotiana tabacum
Nitab4.5_0004977g0020 Nicotiana tabacum
Nn1g05158 Nelumbo nucifera
Nn3g19889 Nelumbo nucifera
Nn5g28875 Nelumbo nucifera
Oeu015853.1 Olea europaea
Oeu028366.1 Olea europaea
Oeu031971.2 Olea europaea
Os03g0242200 Oryza sativa ssp. japonica
Os10g0135200 Oryza sativa ssp. japonica
Peaxi162Scf00106g01615 Petunia axillaris
Peaxi162Scf00270g00910 Petunia axillaris
PGR102G1870 Punica granatum
PGSC0003DMG402031196 Solanum tuberosum
Phvul.002G265300 Phaseolus vulgaris
Potri.005G085100 Populus trichocarpa
Potri.007G080100 Populus trichocarpa
Prupe.1G587300 Prunus persica
Psat7g050920 Pisum sativum
PSO170G2871 Papaver somniferum
PSO210G1492 Papaver somniferum
PSO541G5773 Papaver somniferum
PSO675G4086 Papaver somniferum
QL06p031876 Quercus lobata
RcHm_v2.0_Chr2g0117121 Rosa chinensis
Rhsim07G0116100 Rhododendron simsii
Rhsim08G0005500 Rhododendron simsii
Rhsim10G0148900 Rhododendron simsii
Sabra05G0069900 Salix brachista
Sabra07G0067200 Salix brachista
SalBow5G1590 Salvia bowleyana
SalBow6G4125 Salvia bowleyana
Sc03g0004440 Simmondsia chinensis
Sc07g0001570 Simmondsia chinensis
Sed0006410 Sechium edule
Sed0024973 Sechium edule
SEGI_23806 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01290 Striga asiatica
SMO364G0333 Selaginella moellendorffii
Solyc04g051700.3 Solanum lycopersicum
Sopen04g023080 Solanum pennellii
Sp2g27880 Schrenkiella parvula
Sp6g33500 Schrenkiella parvula
TAR381G0083 Trochodendron aralioides
TAR625G1069 Trochodendron aralioides
TAR628G1042 Trochodendron aralioides
THA.LOC104799321 Tarenaya hassleriana
THA.LOC104819313 Tarenaya hassleriana
Thecc.01G114600 Theobroma cacao
Thhalv10004519m.g Eutrema salsugineum
TPR.G2235 Trifolium pratense
TWI79G1778 Tripterygium wilfordii
unitig_0.g479 Utricularia gibba
vmacro12895 Vaccinium macrocarpon
vmacro18639 Vaccinium macrocarpon
VMungo0251G1621 Vigna mungo
Zm00001eb224280 Zea mays
Zm00001eb398890 Zea mays

User provided reference genes

Program Settings