Gene: AT5G64813

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G64813
  • Transcript Identifier AT5G64813.2
  • Gene Type Coding gene
  • Location Chr5 : 25910836-25912625 : positive

Gene Family Information

  • ID HOM05D004317
  • #Genes/#Species 165/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G64813.2
  • symbol LIP1
  • full_name Light Insensitive Period1
  • uniprot Q9C5J9

Descriptions

  • Description Ras-related small GTP-binding family protein
  • Computational description Light Insensitive Period1 (LIP1); FUNCTIONS IN: GTPase activity; INVOLVED IN: circadian regulation of gene expression, photomorphogenesis; LOCATED IN: nucleus, cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), RNA polymerase sigma factor 54, interaction (InterPro:IPR002078); BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G09910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009107
IBA
Gene Ontologylipoate biosynthetic process1
GO:0006886
IBA
Gene Ontologyintracellular protein transport1
GO:0032922
IMP
Gene Ontologycircadian regulation of gene expression2
GO:0009640
IMP
Gene Ontologyphotomorphogenesis2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IDA
IBA
Gene OntologyGTPase activity1 2
GO:0003924
IEA
InterProGTPase activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016992
IBA
Gene Ontologylipoate synthase activity1
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus2
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm2
GO:0005739
IBA
Gene Ontologymitochondrion1
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0012505
IBA
Gene Ontologyendomembrane system1
GO:0009507
ISM
Gene Ontologychloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001806 Small GTPase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
35.1 not assigned.annotated