Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09440 Brassica napus
A04p09530 Brassica napus
Ah.10g028620 Amaranthus hybridus
Ah.10g028820 Amaranthus hybridus
Ah.12g057880 Amaranthus hybridus
AL8G12400 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.4JQ3QL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5E6QYU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.81GM5H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86CJ1T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8KX3ZR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8LYJ6L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C5IA5B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E3XYYX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3FVC7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JQU8UC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K8XT55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NTK3LG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y9PUBE Arachis hypogaea
AT2G07695 Arabidopsis thaliana
ATMG00160 Arabidopsis thaliana
ATMG01280 Arabidopsis thaliana
ATR0461G001 Amborella trichopoda
ATR0461G002 Amborella trichopoda
ATR0513G001 Amborella trichopoda
AUR62001625 Chenopodium quinoa
AUR62001626 Chenopodium quinoa
AUR62042348 Chenopodium quinoa
AUR62042349 Chenopodium quinoa
BolSC28t60319H Brassica oleracea
BolSC28t60374H Brassica oleracea
BolSC28t60389H Brassica oleracea
BolSC28t60391H Brassica oleracea
BolSC28t60408H Brassica oleracea
BraSC177t45746Z Brassica rapa
BraSC48t46243Z Brassica rapa
BraSC48t46285Z Brassica rapa
BraSC48t46299Z Brassica rapa
BraSC48t46334Z Brassica rapa
BraSC54t46353Z Brassica rapa
BraSC54t46371Z Brassica rapa
BraSC54t46377Z Brassica rapa
BraSC77t46631Z Brassica rapa
CAN.G1173.2 Capsicum annuum
CAN.G1449.6 Capsicum annuum
CAN.G15876.1 Capsicum annuum
CAN.G184.83 Capsicum annuum
CAN.G1897.5 Capsicum annuum
CAN.G390.18 Capsicum annuum
CAN.G595.5 Capsicum annuum
CAN.G687.3 Capsicum annuum
CAN.G8.27 Capsicum annuum
CANSAT16G0053 Cannabis sativa
CARHR282690 Cardamine hirsuta
CARHR283480 Cardamine hirsuta
Ca_03780_v3 Cicer arietinum L.
Ca_16076_v3 Cicer arietinum L.
Ca_31296_v3 Cicer arietinum L.
CDE02G1233 Ceratophyllum demersum
Cfa021332 Carpinus fangiana
ClCG06G009310 Citrullus lanatus
Cpa.g.sc555.1 Carica papaya
Cre01.g049500 Chlamydomonas reinhardtii
Cre03.g154350 Chlamydomonas reinhardtii
CsaV3_5G015800 Cucumis sativus L.
DCAR_022731 Daucus carota
DCAR_032452 Daucus carota
Dinv06711 Davidia involucrata
Dinv06717 Davidia involucrata
Eucgr.I01856 Eucalyptus grandis
Glyma.09G040100 Glycine max
Gorai.001G161700 Gossypium raimondii
GSVIVG01006909001 Vitis vinifera
HanXRQChr00c0192g0572351 Helianthus annuus
HanXRQChr04g0112911 Helianthus annuus
HanXRQMTg0579451 Helianthus annuus
HanXRQMTg0579681 Helianthus annuus
Haze_27535 Corylus avellana
Hma1.2p1_0716F.1_g208040 Hydrangea macrophylla
Hma1.2p1_0716F.1_g208050 Hydrangea macrophylla
Lalb_Chr00c21g0405651 Lupinus albus
Lalb_Chr00c24g0407111 Lupinus albus
Lalb_Chr23g0276811 Lupinus albus
Lalb_Chr24g0400601 Lupinus albus
Lj5g0026615 Lotus japonicus
LjContig00315g0005262 Lotus japonicus
LjContig00315g0005528 Lotus japonicus
Lsat_1_v5_gn_4_50261 Lactuca sativa
Lsat_1_v5_gn_6_95140 Lactuca sativa
Lsat_1_v5_gn_6_95160 Lactuca sativa
Mapoly0007s0023 Marchantia polymorpha
Mapoly0041s0129 Marchantia polymorpha
MBI05_g05354_MAGBIO Magnolia biondii
MELO3C030794.2 Cucumis melo
Migut.J01259 Erythranthe guttata
Nitab4.5_0000007g0310 Nicotiana tabacum
Nitab4.5_0000216g0120 Nicotiana tabacum
Nitab4.5_0000280g0210 Nicotiana tabacum
Nitab4.5_0001819g0010 Nicotiana tabacum
Nitab4.5_0007876g0040 Nicotiana tabacum
Nitab4.5_0023703g0010 Nicotiana tabacum
Nn1g09987 Nelumbo nucifera
Nn1g09996 Nelumbo nucifera
Nn1g09999 Nelumbo nucifera
Nn1g10072 Nelumbo nucifera
Nn1g10097 Nelumbo nucifera
Oeu042472.1 Olea europaea
Os04g0343050 Oryza sativa ssp. japonica
Peaxi162Scf00187g00115 Petunia axillaris
Peaxi162Scf00197g00017 Petunia axillaris
Peaxi162Scf00268g01210 Petunia axillaris
PGSC0003DMG400006473 Solanum tuberosum
PGSC0003DMG400013864 Solanum tuberosum
PGSC0003DMG400020450 Solanum tuberosum
PGSC0003DMG400023928 Solanum tuberosum
PGSC0003DMG401031302 Solanum tuberosum
Phvul.009G252600 Phaseolus vulgaris
Potri.007G061781 Populus trichocarpa
Psat0s4951g0120 Pisum sativum
Psat1g132320 Pisum sativum
Psat3g172200 Pisum sativum
Psat6g041360 Pisum sativum
RcHm_v2.0_MTg0498241 Rosa chinensis
RcHm_v2.0_MTg0498571 Rosa chinensis
RhsimMtG0001900 Rhododendron simsii
SabraMtG0008700 Salix brachista
Sc08g0004800 Simmondsia chinensis
Sed0009617 Sechium edule
Sed0021216 Sechium edule
Sed0022989 Sechium edule
SGA_v2.0_scaffold245G44781 Striga asiatica
SGA_v2.0_scaffold420G51405 Striga asiatica
SHI06816 Sapria himalayana
SHI08953 Sapria himalayana
SHI09335 Sapria himalayana
SHI33022 Sapria himalayana
SMO053G0010 Selaginella moellendorffii
SMO053G0014 Selaginella moellendorffii
Solyc00g500101.1 Solanum lycopersicum
Solyc00g500102.1 Solanum lycopersicum
Solyc00g500118.1 Solanum lycopersicum
Solyc00g500119.1 Solanum lycopersicum
Solyc00g500244.1 Solanum lycopersicum
Solyc00g500275.1 Solanum lycopersicum
Solyc00g500276.1 Solanum lycopersicum
Solyc00g500310.1 Solanum lycopersicum
Solyc00g500359.1 Solanum lycopersicum
Solyc00g500360.1 Solanum lycopersicum
Solyc02g021365.1 Solanum lycopersicum
Solyc03g063780.1 Solanum lycopersicum
Solyc05g045850.3 Solanum lycopersicum
Solyc05g045870.2 Solanum lycopersicum
Solyc05g045930.1 Solanum lycopersicum
Solyc09g015880.4 Solanum lycopersicum
Solyc09g015890.4 Solanum lycopersicum
Solyc12g035825.1 Solanum lycopersicum
Sopen00g002740 Solanum pennellii
Sopen00g002750 Solanum pennellii
Sopen00g002770 Solanum pennellii
TAR022G0001 Trochodendron aralioides
TAR371G1150 Trochodendron aralioides
Thecc.10G006300 Theobroma cacao
Thhalv10023011m.g Eutrema salsugineum
TPR.G581 Trifolium pratense
unitig_87.g27941 Utricularia gibba
VMungo1309G0827 Vigna mungo

User provided reference genes

Program Settings