Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p34320 Brassica napus
A05p01570 Brassica napus
Aa31LG1G27620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2613 Anthoceros agrestis
Actinidia10088 Actinidia chinensis
Actinidia10089 Actinidia chinensis
Actinidia20176 Actinidia chinensis
Ah.05g180030 Amaranthus hybridus
AL1G39200 Arabidopsis lyrata
AL1G41100 Arabidopsis lyrata
AL4G45500 Arabidopsis lyrata
Aqoxy7G00185 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4FI6MM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BP50A3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K2BJ17 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X3APAR Arachis hypogaea
AT1G26530 Arabidopsis thaliana
AT2G46230 Arabidopsis thaliana
ATR0585G106 Amborella trichopoda
Atru.chr5.606 Acer truncatum
AUR62004429 Chenopodium quinoa
AUR62022636 Chenopodium quinoa
BcaB06g29435 Brassica carinata
BcaC02g07027 Brassica carinata
BcaC02g12509 Brassica carinata
BcaC02g12702 Brassica carinata
BraA04t18893Z Brassica rapa
BraA05t19152Z Brassica rapa
C04p01790 Brassica napus
C04p72140 Brassica napus
CAN.G1143.25 Capsicum annuum
CANSAT78G1628 Cannabis sativa
CARHR025440 Cardamine hirsuta
Carub.0004s2893 Capsella rubella
Ca_09481_v3 Cicer arietinum L.
Ca_25855_v3 Cicer arietinum L.
CBR_g20329 Chara braunii
Cc00_g30190 Coffea canephora
Cc02_g38790 Coffea canephora
CDE05G0403 Ceratophyllum demersum
CDE11G0451 Ceratophyllum demersum
CDE11G0794 Ceratophyllum demersum
Cfa003820 Carpinus fangiana
Ciclev10022345m.g Citrus clementina
CiPaw.01G069700 Carya illinoinensis
ClCG10G016120 Citrullus lanatus
COL.COLO4_06361 Corchorus olitorius
Cpa.g.sc184.11 Carica papaya
Cre16.g679450 Chlamydomonas reinhardtii
CsaV3_3G040290 Cucumis sativus L.
CSS0045220 Camellia sinensis var. sinensis
DCAR_005368 Daucus carota
DCAR_017055 Daucus carota
Dinv32536 Davidia involucrata
Duzib133G1515 Durio zibethinus
Duzib138G1911 Durio zibethinus
ECA234G2670 Erigeron canadensis
EL10Ac1g00335 Beta vulgaris
Eucgr.E00082 Eucalyptus grandis
FAN01G1870 Fragaria x ananassa
FAN06G0043 Fragaria x ananassa
FAN06G3034 Fragaria x ananassa
FAN10G0892 Fragaria x ananassa
FAN10G4166 Fragaria x ananassa
FvH4_7g15670 Fragaria vesca
Glyma.03G254200 Glycine max
Glyma.12G191100 Glycine max
Glyma.13G310600 Glycine max
Glyma.19G251700 Glycine max
Gohir.A06G141040 Gossypium hirsutum
Gohir.A11G093300 Gossypium hirsutum
Gohir.D11G098300 Gossypium hirsutum
Gorai.007G104500 Gossypium raimondii
GSVIVG01026915001 Vitis vinifera
GSVIVG01026916001 Vitis vinifera
GSVIVG01027024001 Vitis vinifera
HanXRQChr17g0562231 Helianthus annuus
Haze_15633 Corylus avellana
Haze_27571 Corylus avellana
HPP92_002823 Vanilla planifolia
HPP92_002881 Vanilla planifolia
HPP92_002892 Vanilla planifolia
Hund16683 Selenicereus undatus
Lalb_Chr04g0261801 Lupinus albus
Lj1g0009566 Lotus japonicus
Lj3g0009308 Lotus japonicus
Lj9C594T5 Lonicera japonica
Lsat_1_v5_gn_2_67120 Lactuca sativa
Lsat_1_v5_gn_4_34121 Lactuca sativa
Manes.11G086700 Manihot esculenta
Mapoly0007s0029 Marchantia polymorpha
MBI02_g45291_MAGBIO Magnolia biondii
MBI06_g29321_MAGBIO Magnolia biondii
MBI07_g03903_MAGBIO Magnolia biondii
MBI17_g03297_MAGBIO Magnolia biondii
MBI18_g19490_MAGBIO Magnolia biondii
MCO11G412 Micromonas commoda
MD01G1073500 Malus domestica
Medtr6g086290 Medicago truncatula
Medtr7g116720 Medicago truncatula
MELO3C009766.2 Cucumis melo
Migut.B01814 Erythranthe guttata
Migut.N01579 Erythranthe guttata
MSTRG.17308 Avicennia marina
Nitab4.5_0000305g0280 Nicotiana tabacum
Nitab4.5_0004748g0010 Nicotiana tabacum
Nn5g30298 Nelumbo nucifera
Oeu004920.1 Olea europaea
Oeu048599.1 Olea europaea
Os06g0158600 Oryza sativa ssp. japonica
Peaxi162Scf01254g00021 Petunia axillaris
PGR031G2222 Punica granatum
PGSC0003DMG402002606 Solanum tuberosum
Phvul.005G117100 Phaseolus vulgaris
Potri.002G166200 Populus trichocarpa
Potri.014G092600 Populus trichocarpa
Pp3c11_12810 Physcomitrium patens
Pp3c7_15560 Physcomitrium patens
PRCOL_00001531 Prasinoderma coloniale
Prupe.2G181300 Prunus persica
Psat3g005280 Pisum sativum
PSO135G0697 Papaver somniferum
PSO210G0614 Papaver somniferum
PSO302G0143 Papaver somniferum
PSO384G3706 Papaver somniferum
QL04p058903 Quercus lobata
QL06p021685 Quercus lobata
QL08p061068 Quercus lobata
RcHm_v2.0_Chr1g0326781 Rosa chinensis
RcHm_v2.0_Chr1g0358391 Rosa chinensis
RcHm_v2.0_Chr3g0464711 Rosa chinensis
RcHm_v2.0_Chr4g0446551 Rosa chinensis
RcHm_v2.0_Chr5g0018241 Rosa chinensis
RcHm_v2.0_Chr5g0047481 Rosa chinensis
Rhsim01G0168500 Rhododendron simsii
Rhsim11G0144600 Rhododendron simsii
Sabra02G0145400 Salix brachista
Sabra14G0067200 Salix brachista
SalBow1G3478 Salvia bowleyana
SalBow3G3563 Salvia bowleyana
Sc23g0002430 Simmondsia chinensis
Sed0018576 Sechium edule
Sed0023585 Sechium edule
SEGI_17768 Sequoiadendron giganteum
SGA_v2.0_scaffold95G28798 Striga asiatica
SHI12502 Sapria himalayana
SHI29225 Sapria himalayana
SMO117G0002 Selaginella moellendorffii
Solyc03g121130.3 Solanum lycopersicum
Sopen03g039960 Solanum pennellii
Sp4g28280 Schrenkiella parvula
TAR374G1118 Trochodendron aralioides
TAR375G0154 Trochodendron aralioides
THA.LOC104802050 Tarenaya hassleriana
Thecc.01G349900 Theobroma cacao
Thhalv10001643m.g Eutrema salsugineum
TPR.G4704 Trifolium pratense
TWI14G0490 Tripterygium wilfordii
TWI59G1141 Tripterygium wilfordii
unitig_736.g22824 Utricularia gibba
VMungo1080G0287 Vigna mungo
Zm00001eb376200 Zea mays
Zm00001eb376230 Zea mays
Zm00001eb376270 Zea mays
Zm00001eb376300 Zea mays
Zm00001eb376330 Zea mays

User provided reference genes

Program Settings