Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p09160 Brassica napus
A08p32810 Brassica napus
Aa31LG1G2150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3812 Anthoceros agrestis
Actinidia24571 Actinidia chinensis
Actinidia30490 Actinidia chinensis
Actinidia39296 Actinidia chinensis
Ah.11g047230 Amaranthus hybridus
AL1G23830 Arabidopsis lyrata
Aqoxy1G01192 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0PC56D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J1BTWL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RA2UAB Arachis hypogaea
AT1G12470 Arabidopsis thaliana
ATR0737G173 Amborella trichopoda
Atru.chr3.3152 Acer truncatum
Atru.chr5.268 Acer truncatum
Atru.chr6.3077 Acer truncatum
AUR62034472 Chenopodium quinoa
AUR62041769 Chenopodium quinoa
BcaB03g13185 Brassica carinata
BcaC05g25136 Brassica carinata
BcaC05g25186 Brassica carinata
BolC5t29815H Brassica oleracea
BolC8t49173H Brassica oleracea
BraA06t24102Z Brassica rapa
BraA08t35204Z Brassica rapa
C05p10740 Brassica napus
C08p15450 Brassica napus
CAN.G2148.1 Capsicum annuum
CAN.G2148.2 Capsicum annuum
CAN.G2148.3 Capsicum annuum
CAN.G224.15 Capsicum annuum
CAN.G224.16 Capsicum annuum
CAN.G224.17 Capsicum annuum
CAN.G224.18 Capsicum annuum
CAN.G666.1 Capsicum annuum
CANSAT64G2398 Cannabis sativa
CARHR012770 Cardamine hirsuta
Carub.0001s1218 Capsella rubella
Ca_01536_v3 Cicer arietinum L.
CBR_g40701 Chara braunii
CBR_g40703 Chara braunii
CBR_g50947 Chara braunii
Cc04_g12270 Coffea canephora
CDE05G0585 Ceratophyllum demersum
Cfa010655 Carpinus fangiana
Cfa014543 Carpinus fangiana
Cfa022578 Carpinus fangiana
Ciclev10014147m.g Citrus clementina
CiPaw.03G169700 Carya illinoinensis
ClCG02G001300 Citrullus lanatus
COL.COLO4_13682 Corchorus olitorius
Cpa.g.sc34.88 Carica papaya
Cpa.g.sc34.89 Carica papaya
Cre07.g328550 Chlamydomonas reinhardtii
CsaV3_7G004120 Cucumis sativus L.
CSS0002238 Camellia sinensis var. sinensis
CSS0002414 Camellia sinensis var. sinensis
CSS0005038 Camellia sinensis var. sinensis
CSS0009942 Camellia sinensis var. sinensis
CSS0035062 Camellia sinensis var. sinensis
CSS0035503 Camellia sinensis var. sinensis
CSS0037177 Camellia sinensis var. sinensis
CSS0039065 Camellia sinensis var. sinensis
DCAR_009724 Daucus carota
Dinv23715 Davidia involucrata
Dinv23716 Davidia involucrata
Duzib248G0991 Durio zibethinus
ECA246G4434 Erigeron canadensis
EL10As1g23122 Beta vulgaris
Eucgr.K00914 Eucalyptus grandis
FAN02G3638 Fragaria x ananassa
FAN09G1275 Fragaria x ananassa
FAN14G1228 Fragaria x ananassa
FvH4_6g44560 Fragaria vesca
Glyma.08G214950 Glycine max
Glyma.12G201100 Glycine max
Glyma.13G301100 Glycine max
Gohir.A01G015400 Gossypium hirsutum
Gohir.D01G015400 Gossypium hirsutum
Gorai.002G017100 Gossypium raimondii
GSVIVG01030005001 Vitis vinifera
HanXRQChr07g0200651 Helianthus annuus
Haze_03591 Corylus avellana
Haze_13086 Corylus avellana
Hma1.2p1_0565F.1_g179560 Hydrangea macrophylla
Hma1.2p1_0565F.1_g179570 Hydrangea macrophylla
HPP92_004167 Vanilla planifolia
Lalb_Chr22g0356351 Lupinus albus
Lj1C736G5 Lonicera japonica
Lj1C736T2 Lonicera japonica
Lj3g0003932 Lotus japonicus
Lj8C117G6 Lonicera japonica
Lsat_1_v5_gn_3_39980 Lactuca sativa
Manes.12G082900 Manihot esculenta
Manes.13G151750 Manihot esculenta
Mapoly0011s0120 Marchantia polymorpha
MBI02_g13236_MAGBIO Magnolia biondii
MCO01G063 Micromonas commoda
MCO10G067 Micromonas commoda
MD02G1222100 Malus domestica
MD14G1065300 Malus domestica
MD17G1084700 Malus domestica
Medtr5g026090 Medicago truncatula
Medtr8g063380 Medicago truncatula
Medtr8g471030 Medicago truncatula
MELO3C018764.2 Cucumis melo
Migut.O00120 Erythranthe guttata
MSTRG.11470 Avicennia marina
MSTRG.11471 Avicennia marina
Nitab4.5_0000025g0490 Nicotiana tabacum
Nitab4.5_0000025g0500 Nicotiana tabacum
Nitab4.5_0000025g0510 Nicotiana tabacum
Nitab4.5_0001514g0010 Nicotiana tabacum
Nitab4.5_0001514g0020 Nicotiana tabacum
Nn2g15850 Nelumbo nucifera
Oeu001692.1 Olea europaea
Oeu001693.1 Olea europaea
Oeu001695.1 Olea europaea
Os08g0178100 Oryza sativa ssp. japonica
Peaxi162Scf00255g01022 Petunia axillaris
PGR142G2990 Punica granatum
PGSC0003DMG400025399 Solanum tuberosum
Phvul.005G107700 Phaseolus vulgaris
Potri.013G147600 Populus trichocarpa
Pp3c14_1240 Physcomitrium patens
PRCOL_00001544 Prasinoderma coloniale
Prupe.3G231000 Prunus persica
Psat2g144400 Pisum sativum
PSO339G5244 Papaver somniferum
PSO801G0468 Papaver somniferum
QL08p037237 Quercus lobata
QL08p037295 Quercus lobata
RcHm_v2.0_Chr2g0161771 Rosa chinensis
Rhsim04G0063000 Rhododendron simsii
Sabra13G0119200 Salix brachista
SalBow7G3995 Salvia bowleyana
Sc08g0004410 Simmondsia chinensis
Sed0028127 Sechium edule
SEGI_06467 Sequoiadendron giganteum
SEGI_10945 Sequoiadendron giganteum
SEGI_15765 Sequoiadendron giganteum
SEGI_16142 Sequoiadendron giganteum
SEGI_22414 Sequoiadendron giganteum
SEGI_30776 Sequoiadendron giganteum
SEGI_32704 Sequoiadendron giganteum
SEGI_34242 Sequoiadendron giganteum
SEGI_40242 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27889 Striga asiatica
SHI10474 Sapria himalayana
SMO239G0082 Selaginella moellendorffii
Solyc06g005080.4 Solanum lycopersicum
Sopen06g001070 Solanum pennellii
Sp1g11070 Schrenkiella parvula
TAR627G0082 Trochodendron aralioides
THA.LOC104809434 Tarenaya hassleriana
Thecc.02G171500 Theobroma cacao
Thhalv10006686m.g Eutrema salsugineum
TPR.G26159 Trifolium pratense
TPR.G27092 Trifolium pratense
TWI75G0058 Tripterygium wilfordii
unitig_0.g1433 Utricularia gibba
unitig_0.g1434 Utricularia gibba
vmacro09293 Vaccinium macrocarpon
VMungo1080G0385 Vigna mungo
Zm00001eb412950 Zea mays

User provided reference genes

Program Settings