Gene: PGSC0003DMG400025399

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400025399
  • Transcript Identifier PGSC0003DMT400065340
  • Gene Type Coding gene
  • Location ST4.03ch06 : 8139349-8146156 : positive

Gene Family Information

  • ID HOM05D004263
  • #Genes/#Species 167/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37452659
  • id PGSC0003DMG400025399.v4.03
  • uniprot M1CDT3

Descriptions

  • Description Vacuolar membrane protein pep3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048284
IBA
GOA Databaseorganelle fusion
GO:0006904
IBA
GOA Databasevesicle docking involved in exocytosis
GO:0007032
IBA
GOA Databaseendosome organization
GO:0007033
IBA
GOA Databasevacuole organization
GO:0016192
ISO
PLAZA Homology (enrichment)vesicle-mediated transport HOM05D004263
GO:0006886
ISO
PLAZA Homology (enrichment)intracellular protein transport HOM05D004263
GO:0010015
ISO
PLAZA Integrative Orthologyroot morphogenesis AT1G12470

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030674
IBA
GOA Databaseprotein-macromolecule adaptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030897
IBA
GOA DatabaseHOPS complex
GO:0005768
IBA
GOA Databaseendosome
GO:0009705
ISO
PLAZA Integrative Orthologyplant-type vacuole membrane AT1G12470
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G12470
GO:0033263
ISO
PLAZA Integrative OrthologyCORVET complex AT1G12470

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
22.3.4.9.3 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.component VPS18