Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43420 Brassica napus
A10p27620 Brassica napus
Aa31LG1G17200 Aethionema arabicum
Aa31LG3G17280 Aethionema arabicum
Actinidia09812 Actinidia chinensis
Ah.02g122290 Amaranthus hybridus
AL6G20250 Arabidopsis lyrata
AL8G42160 Arabidopsis lyrata
Aqoxy5G02078 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3RI1TB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H08UBS Arachis hypogaea
AT5G09840 Arabidopsis thaliana
AT5G64710 Arabidopsis thaliana
ATR0820G094 Amborella trichopoda
ATR0820G284 Amborella trichopoda
AUR62003631 Chenopodium quinoa
AUR62017940 Chenopodium quinoa
BcaB07g29753 Brassica carinata
BcaB08g37170 Brassica carinata
BcaB08g37177 Brassica carinata
BcaC03g18272 Brassica carinata
BolC2t12417H Brassica oleracea
BolC9t59530H Brassica oleracea
BraA02t09267Z Brassica rapa
BraA10t44814Z Brassica rapa
C02p63520 Brassica napus
C09p67680 Brassica napus
CAN.G516.2 Capsicum annuum
CANSAT01G2046 Cannabis sativa
CARHR203550 Cardamine hirsuta
CARHR278700 Cardamine hirsuta
Carub.0006s0826 Capsella rubella
Carub.0008s2552 Capsella rubella
Ca_16911_v3 Cicer arietinum L.
Cc07_g17550 Coffea canephora
CDE06G2757 Ceratophyllum demersum
CDE08G1698 Ceratophyllum demersum
Cfa002810 Carpinus fangiana
Ciclev10024792m.g Citrus clementina
CiPaw.04G086800 Carya illinoinensis
CiPaw.04G087100 Carya illinoinensis
ClCG02G000740 Citrullus lanatus
Cpa.g.sc72.29 Carica papaya
Cpa.g.sc72.30 Carica papaya
CsaV3_2G018000 Cucumis sativus L.
CSS0008059 Camellia sinensis var. sinensis
DCAR_001416 Daucus carota
DCAR_014352 Daucus carota
Dinv12126 Davidia involucrata
Dinv15095 Davidia involucrata
Dinv15097 Davidia involucrata
Duzib147G0824 Durio zibethinus
Duzib187G1764 Durio zibethinus
ECA234G3594 Erigeron canadensis
EL10Ac6g15245 Beta vulgaris
Eucgr.I00260 Eucalyptus grandis
FAN19G0674 Fragaria x ananassa
FAN23G1672 Fragaria x ananassa
FAN26G0764 Fragaria x ananassa
FAN28G2830 Fragaria x ananassa
FvH4_1g23660 Fragaria vesca
Glyma.04G201800 Glycine max
Glyma.04G205700 Glycine max
Glyma.04G216400 Glycine max
Glyma.04G216500 Glycine max
Glyma.04G216600 Glycine max
Glyma.04G218102 Glycine max
Glyma.05G045500 Glycine max
Glyma.17G127700 Glycine max
Gohir.A11G223950 Gossypium hirsutum
Gohir.D11G226360 Gossypium hirsutum
Gohir.D11G259666 Gossypium hirsutum
Gorai.002G150600 Gossypium raimondii
Gorai.007G277700 Gossypium raimondii
GSVIVG01026616001 Vitis vinifera
HanXRQChr10g0296711 Helianthus annuus
Haze_25106 Corylus avellana
Haze_25115 Corylus avellana
HPP92_002646 Vanilla planifolia
Hund03495 Selenicereus undatus
Hund19612 Selenicereus undatus
Lalb_Chr08g0238681 Lupinus albus
Lj1g0022256 Lotus japonicus
Lj2A577G25 Lonicera japonica
Lj2A577G26 Lonicera japonica
Lj2A589G33 Lonicera japonica
Lj4C857T3 Lonicera japonica
Lj4C857T4 Lonicera japonica
Lsat_1_v5_gn_5_101740 Lactuca sativa
Manes.13G082100 Manihot esculenta
MD01G1017000 Malus domestica
MD15G1341400 Malus domestica
MD15G1341500 Malus domestica
Medtr1g008900 Medicago truncatula
Medtr1g008910 Medicago truncatula
Medtr3g095410 Medicago truncatula
Medtr4g098990 Medicago truncatula
Medtr4g101170 Medicago truncatula
Medtr4g119510 Medicago truncatula
Medtr7g077430 Medicago truncatula
Medtr8g011120 Medicago truncatula
Medtr8g011130 Medicago truncatula
Medtr8g011565 Medicago truncatula
Medtr8g011570 Medicago truncatula
Medtr8g033130 Medicago truncatula
MELO3C023273.2 Cucumis melo
Migut.H02473 Erythranthe guttata
MSTRG.23288 Avicennia marina
Nitab4.5_0001582g0040 Nicotiana tabacum
Nitab4.5_0004021g0030 Nicotiana tabacum
Nn1g06076 Nelumbo nucifera
Nn1g06145 Nelumbo nucifera
Nn5g28756 Nelumbo nucifera
Oeu002630.1 Olea europaea
Oeu064303.1 Olea europaea
Os11g0167300 Oryza sativa ssp. japonica
Os12g0162900 Oryza sativa ssp. japonica
Peaxi162Scf00025g02620 Petunia axillaris
PGR119G1219 Punica granatum
PGSC0003DMG400003967 Solanum tuberosum
Phvul.003G208800 Phaseolus vulgaris
Phvul.009G147000 Phaseolus vulgaris
Potri.001G307700 Populus trichocarpa
Potri.019G004000 Populus trichocarpa
Prupe.7G207600 Prunus persica
Psat0s1060g0080 Pisum sativum
Psat5g062600 Pisum sativum
PSO675G0841 Papaver somniferum
PSO675G3917 Papaver somniferum
QL06p030897 Quercus lobata
RcHm_v2.0_Chr2g0119261 Rosa chinensis
Rhsim10G0142400 Rhododendron simsii
Rhsim10G0143200 Rhododendron simsii
Sabra16G0193600 Salix brachista
Sabra19G0004000 Salix brachista
Sabra19G0021500 Salix brachista
SalBow8G4827 Salvia bowleyana
Sc16g0004000 Simmondsia chinensis
Sed0013193 Sechium edule
Sed0020078 Sechium edule
SGA_v2.0_scaffold2G01256 Striga asiatica
SHI11519 Sapria himalayana
SHI11520 Sapria himalayana
Solyc11g005440.2 Solanum lycopersicum
Sopen11g001450 Solanum pennellii
Sp2g27780 Schrenkiella parvula
Sp6g33570 Schrenkiella parvula
TAR250G0005 Trochodendron aralioides
TAR381G1254 Trochodendron aralioides
TAR625G1293 Trochodendron aralioides
THA.LOC104799402 Tarenaya hassleriana
THA.LOC104818467 Tarenaya hassleriana
Thecc.01G119500 Theobroma cacao
Thhalv10005625m.g Eutrema salsugineum
Thhalv10012635m.g Eutrema salsugineum
TPR.G12210 Trifolium pratense
TPR.G12261 Trifolium pratense
TPR.G18710 Trifolium pratense
TPR.G18728 Trifolium pratense
TWI31G0151 Tripterygium wilfordii
TWI79G1577 Tripterygium wilfordii
TWI79G1732 Tripterygium wilfordii
vmacro12820 Vaccinium macrocarpon
VMungo0022G0001 Vigna mungo
VMungo1215G2230 Vigna mungo
VMungo1309G1096 Vigna mungo
Zm00001eb139430 Zea mays

User provided reference genes

Program Settings