Gene: Solyc11g005440.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g005440.2
  • Transcript Identifier Solyc11g005440.2.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 363193-368841 : positive

Gene Family Information

  • ID HOM05D004262
  • #Genes/#Species 167/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g005440.2.1
  • uniprot A0A3Q7JHG2
  • gene_id Solyc11g005440

Descriptions

  • Description Endonuclease or glycosyl hydrolase (AHRD V3.3 *** A0A2U1M909_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010468
IEA
GOA Databaseregulation of gene expression
GO:0010468
IEA
InterProregulation of gene expression
GO:0000964
ISO
PLAZA Integrative Orthologymitochondrial RNA 5'-end processing AT5G64710

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005777
IEA
GOA Databaseperoxisome
GO:0005777
IEA
InterProperoxisome
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G09840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025677 OST-HTH associated domain
IPR041966 LOTUS-like domain
IPR024768 Meiosis regulator and mRNA stability factor 1
IPR025605 OST-HTH/LOTUS domain
IPR021139 NYN domain, limkain-b1-type
Mapman id Description
16.11.1.7 RNA processing.organelle machinery.ribonuclease activities.endoribonuclease (MNU)