Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p16430 Brassica napus
A07p15730 Brassica napus
A07p15830 Brassica napus
A07p41660 Brassica napus
A08p29430 Brassica napus
Aa31LG4G6220 Aethionema arabicum
Aa31LG7G4700 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis
Actinidia37957 Actinidia chinensis
Ah.04g150590 Amaranthus hybridus
AL1G33170 Arabidopsis lyrata
AL2G36140 Arabidopsis lyrata
Aqoxy6G01936 Aquilegia oxysepala
Aqoxy6G01937 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea
AT1G20340 Arabidopsis thaliana
AT1G76100 Arabidopsis thaliana
ATR0661G060 Amborella trichopoda
Atru.chr13.210 Acer truncatum
AUR62013862 Chenopodium quinoa
AUR62036731 Chenopodium quinoa
BcaB03g12872 Brassica carinata
BcaB07g32038 Brassica carinata
BcaC05g25945 Brassica carinata
BcaC07g39030 Brassica carinata
BcaC08g47103 Brassica carinata
BcaC08g47292 Brassica carinata
BcaNung03373 Brassica carinata
BolC5t30597H Brassica oleracea
BolC6t40043H Brassica oleracea
BolC7t42849H Brassica oleracea
BolC8t49642H Brassica oleracea
BraA06t24747Z Brassica rapa
BraA07t29309Z Brassica rapa
BraA07t31695Z Brassica rapa
BraA08t34878Z Brassica rapa
C05p18970 Brassica napus
C06p50040 Brassica napus
C07p23120 Brassica napus
C08p20070 Brassica napus
CAN.G311.79 Capsicum annuum
CANSAT25G3567 Cannabis sativa
CARHR020810 Cardamine hirsuta
CARHR069640 Cardamine hirsuta
Carub.0001s1985 Capsella rubella
Ca_15453_v3 Cicer arietinum L.
CBR_g18572 Chara braunii
Cc01_g01310 Coffea canephora
Cc01_g01320 Coffea canephora
Cc10_g01080 Coffea canephora
CDE02G3101 Ceratophyllum demersum
CDE04G1887 Ceratophyllum demersum
Cfa014015 Carpinus fangiana
Ciclev10002698m.g Citrus clementina
CiPaw.07G143100 Carya illinoinensis
CiPaw.08G069600 Carya illinoinensis
ClCG05G015390 Citrullus lanatus
COL.COLO4_26078 Corchorus olitorius
Cpa.g.sc26.256 Carica papaya
Cre03.g182551 Chlamydomonas reinhardtii
CsaV3_3G046150 Cucumis sativus L.
CSS0046333 Camellia sinensis var. sinensis
DCAR_013894 Daucus carota
Dinv31897 Davidia involucrata
Dinv39560 Davidia involucrata
Duzib116G0390 Durio zibethinus
ECA232G0296 Erigeron canadensis
ECA232G3771 Erigeron canadensis
ECA233G0125 Erigeron canadensis
EL10Ac1g02063 Beta vulgaris
FAN15G0804 Fragaria x ananassa
FAN20G0823 Fragaria x ananassa
FAN27G2657 Fragaria x ananassa
FvH4_2g37890 Fragaria vesca
Glyma.04G020300 Glycine max
Glyma.06G020400 Glycine max
Gohir.A05G182400 Gossypium hirsutum
Gohir.D05G185400 Gossypium hirsutum
Gorai.009G190800 Gossypium raimondii
GSVIVG01008733001 Vitis vinifera
HanXRQChr05g0146621 Helianthus annuus
Haze_22717 Corylus avellana
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla
HPP92_015000 Vanilla planifolia
Lalb_Chr01g0008481 Lupinus albus
Lalb_Chr03g0033581 Lupinus albus
Lalb_Chr19g0131621 Lupinus albus
Lj1g0015317 Lotus japonicus
Lj4C16T12 Lonicera japonica
Lj4P802T100 Lonicera japonica
Lsat_1_v5_gn_0_680 Lactuca sativa
Lsat_1_v5_gn_8_28601 Lactuca sativa
Manes.05G142000 Manihot esculenta
Mapoly0080s0027 Marchantia polymorpha
MBI05_g34744_MAGBIO Magnolia biondii
MBI08_g05719_MAGBIO Magnolia biondii
MCO15G475 Micromonas commoda
MD08G1007200 Malus domestica
MD15G1006300 Malus domestica
Medtr3g114850 Medicago truncatula
MELO3C003725.2 Cucumis melo
Migut.C00904 Erythranthe guttata
Migut.E01154 Erythranthe guttata
Migut.N03188 Erythranthe guttata
Nitab4.5_0000498g0120 Nicotiana tabacum
Nitab4.5_0001476g0060 Nicotiana tabacum
Nitab4.5_0001936g0030 Nicotiana tabacum
Nitab4.5_0002353g0080 Nicotiana tabacum
Nitab4.5_0003030g0010 Nicotiana tabacum
Nitab4.5_0006806g0080 Nicotiana tabacum
Nitab4.5_0007524g0020 Nicotiana tabacum
Nn6g31900 Nelumbo nucifera
Oeu021483.1 Olea europaea
Oeu027609.1 Olea europaea
Oeu051143.1 Olea europaea
Os06g0101600 Oryza sativa ssp. japonica
Peaxi162Scf00174g00103 Petunia axillaris
PGR031G2466 Punica granatum
PGSC0003DMG400041620 Solanum tuberosum
Phvul.009G020300 Phaseolus vulgaris
Potri.002G016000 Populus trichocarpa
Potri.005G246100 Populus trichocarpa
Pp3c18_13090 Physcomitrium patens
Pp3c19_21160 Physcomitrium patens
Pp3c21_4230 Physcomitrium patens
PRCOL_00002380 Prasinoderma coloniale
Prupe.1G358900 Prunus persica
Psat5g011080 Pisum sativum
PSO541G1800 Papaver somniferum
PSO675G9160 Papaver somniferum
QL02p013016 Quercus lobata
RcHm_v2.0_Chr6g0303721 Rosa chinensis
Rhsim06G0011800 Rhododendron simsii
Rhsim07G0251400 Rhododendron simsii
Sabra02G0012900 Salix brachista
Sabra05G0190200 Salix brachista
SalBow6G1848 Salvia bowleyana
Sc02g0008920 Simmondsia chinensis
Sc26g0004480 Simmondsia chinensis
Sed0002819 Sechium edule
Sed0013890 Sechium edule
SEGI_02730 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08591 Striga asiatica
SMO351G0102 Selaginella moellendorffii
Solyc04g082010.1 Solanum lycopersicum
Sopen04g035660 Solanum pennellii
Sp1g18060 Schrenkiella parvula
Sp5g31220 Schrenkiella parvula
TAR381G1019 Trochodendron aralioides
TAR625G1162 Trochodendron aralioides
TAR628G0544 Trochodendron aralioides
THA.LOC104809663 Tarenaya hassleriana
THA.LOC104813771 Tarenaya hassleriana
Thecc.08G052400 Theobroma cacao
Thhalv10008749m.g Eutrema salsugineum
Thhalv10019237m.g Eutrema salsugineum
TPR.G38114 Trifolium pratense
TPR.G8442 Trifolium pratense
TWI12G1003 Tripterygium wilfordii
TWI56G0334 Tripterygium wilfordii
unitig_899.g15551 Utricularia gibba
VMungo1309G1934 Vigna mungo
Zm00001eb268360 Zea mays
Zm00001eb379570 Zea mays

User provided reference genes

Program Settings