Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p39800 Brassica napus
Aa31LG4G4250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3880 Anthoceros agrestis
Actinidia31032 Actinidia chinensis
Actinidia39807 Actinidia chinensis
Ah.11g047140 Amaranthus hybridus
AL2G33790 Arabidopsis lyrata
Aqoxy3G03901 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1842CP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1HJL67 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.269HHI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.868KN4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9R3CPH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CB5LZE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CPL525 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FN32SY Arachis hypogaea
AT1G73960 Arabidopsis thaliana
ATR0564G329 Amborella trichopoda
Atru.chr9.749 Acer truncatum
AUR62032188 Chenopodium quinoa
AUR62036947 Chenopodium quinoa
BolC6t39842H Brassica oleracea
BraA07t31527Z Brassica rapa
C06p48070 Brassica napus
CAN.G438.113 Capsicum annuum
CANSAT80G0956 Cannabis sativa
CARHR067070 Cardamine hirsuta
Carub.0002s2073 Capsella rubella
Ca_02536_v3 Cicer arietinum L.
Cc04_g07550 Coffea canephora
CDE05G2534 Ceratophyllum demersum
Cfa019828 Carpinus fangiana
Cfa022283 Carpinus fangiana
Ciclev10018514m.g Citrus clementina
CiPaw.15G126300 Carya illinoinensis
ClCG04G011280 Citrullus lanatus
COL.COLO4_22715 Corchorus olitorius
COL.COLO4_22716 Corchorus olitorius
Cpa.g.sc1020.1 Carica papaya
Cpa.g.sc1020.2 Carica papaya
Cpa.g.sc13.49 Carica papaya
Cpa.g.sc13.54 Carica papaya
Cpa.g.sc13.56 Carica papaya
Cre13.g583500 Chlamydomonas reinhardtii
CsaV3_1G006480 Cucumis sativus L.
CSS0006085 Camellia sinensis var. sinensis
CSS0012337 Camellia sinensis var. sinensis
DCAR_001432 Daucus carota
Dinv38590 Davidia involucrata
Duzib084G0462 Durio zibethinus
Duzib205G0916 Durio zibethinus
ECA246G5151 Erigeron canadensis
EL10Ac5g11246 Beta vulgaris
Eucgr.K02653 Eucalyptus grandis
FAN04G0815 Fragaria x ananassa
FAN08G0408 Fragaria x ananassa
FAN13G0239 Fragaria x ananassa
FAN18G1390 Fragaria x ananassa
FAN18G2177 Fragaria x ananassa
FvH4_5g12730 Fragaria vesca
Glyma.05G013400 Glycine max
Glyma.17G121600 Glycine max
Gohir.A07G038666 Gossypium hirsutum
Gohir.A07G038732 Gossypium hirsutum
Gohir.D07G042740 Gossypium hirsutum
Gohir.D07G042780 Gossypium hirsutum
Gohir.D07G042820 Gossypium hirsutum
Gohir.D07G042860 Gossypium hirsutum
Gorai.001G045800 Gossypium raimondii
GSVIVG01008230001 Vitis vinifera
HanXRQChr05g0153841 Helianthus annuus
Haze_18607 Corylus avellana
Haze_18609 Corylus avellana
Haze_18610 Corylus avellana
Haze_18611 Corylus avellana
Hma1.2p1_0595F.1_g186000 Hydrangea macrophylla
Hma1.2p1_0595F.1_g186010 Hydrangea macrophylla
HPP92_023454 Vanilla planifolia
HPP92_023478 Vanilla planifolia
Hund02527 Selenicereus undatus
Lalb_Chr12g0197541 Lupinus albus
Lj4g0001448 Lotus japonicus
Lj6g0001849 Lotus japonicus
Lj9A432G69 Lonicera japonica
Lj9A432T73 Lonicera japonica
Lj9P432G41 Lonicera japonica
Lsat_1_v5_gn_4_30120 Lactuca sativa
Lsat_1_v5_gn_5_25060 Lactuca sativa
Manes.05G119100 Manihot esculenta
Mapoly0014s0115 Marchantia polymorpha
MCO15G430 Micromonas commoda
MCO16G579 Micromonas commoda
MD06G1210800 Malus domestica
MD06G1211000 Malus domestica
MD14G1221500 Malus domestica
MD14G1221600 Malus domestica
Medtr0268s0020 Medicago truncatula
Medtr1014s0010 Medicago truncatula
Medtr1091s0010 Medicago truncatula
Medtr4g113340 Medicago truncatula
Medtr4g113360 Medicago truncatula
Medtr4g113485 Medicago truncatula
Medtr4g113495 Medicago truncatula
Medtr7g029065 Medicago truncatula
MELO3C002074.2 Cucumis melo
Migut.J01004 Erythranthe guttata
MSTRG.5865 Avicennia marina
Nitab4.5_0000410g0130 Nicotiana tabacum
Nitab4.5_0001599g0210 Nicotiana tabacum
Nn4g23713 Nelumbo nucifera
Oeu004769.3 Olea europaea
Os09g0409950 Oryza sativa ssp. japonica
Os09g0410125 Oryza sativa ssp. japonica
Os09g0410300 Oryza sativa ssp. japonica
Peaxi162Scf00015g00072 Petunia axillaris
PGR044G2306 Punica granatum
PGSC0003DMG400005622 Solanum tuberosum
Phvul.003G177400 Phaseolus vulgaris
Potri.015G050800 Populus trichocarpa
Pp3c18_6100 Physcomitrium patens
Pp3c21_15920 Physcomitrium patens
PRCOL_00003918 Prasinoderma coloniale
Prupe.5G217000 Prunus persica
Psat4g043600 Pisum sativum
PSO017G0533 Papaver somniferum
PSO478G4514 Papaver somniferum
QL10p022943 Quercus lobata
RcHm_v2.0_Chr7g0184581 Rosa chinensis
Rhsim08G0137900 Rhododendron simsii
Rhsim08G0138000 Rhododendron simsii
Sabra15G0075800 Salix brachista
SalBow3G4568 Salvia bowleyana
SalBow8G1216 Salvia bowleyana
Sc10g0009590 Simmondsia chinensis
Sed0006394 Sechium edule
SEGI_21625 Sequoiadendron giganteum
SEGI_35421 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06699 Striga asiatica
SHI18919 Sapria himalayana
SHI18921 Sapria himalayana
SHI18922 Sapria himalayana
SHI18924 Sapria himalayana
SHI18927 Sapria himalayana
SHI18928 Sapria himalayana
SHI18929 Sapria himalayana
SHI18930 Sapria himalayana
SMO367G1244 Selaginella moellendorffii
Solyc03g119780.4 Solanum lycopersicum
Sopen03g038630 Solanum pennellii
Sp5g29160 Schrenkiella parvula
TAR371G0173 Trochodendron aralioides
TAR371G0728 Trochodendron aralioides
TAR629G2837 Trochodendron aralioides
THA.LOC104812129 Tarenaya hassleriana
Thecc.03G027900 Theobroma cacao
Thhalv10002734m.g Eutrema salsugineum
Thhalv10018013m.g Eutrema salsugineum
TPR.G26791 Trifolium pratense
TWI60G0758 Tripterygium wilfordii
TWI81G0292 Tripterygium wilfordii
unitig_578.g15823 Utricularia gibba
vmacro17678 Vaccinium macrocarpon
vmacro17679 Vaccinium macrocarpon
VMungo1215G1362 Vigna mungo
Zm00001eb099340 Zea mays
Zm00001eb099350 Zea mays
Zm00001eb099360 Zea mays
Zm00001eb312360 Zea mays

User provided reference genes

Program Settings