Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p12270 Brassica napus
A04p12280 Brassica napus
A04p12290 Brassica napus
Aa31LG9G16510 Aethionema arabicum
Actinidia06102 Actinidia chinensis
AL7G50770 Arabidopsis lyrata
AL7G50790 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.55PBKN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7SZ544 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SU00NT Arachis hypogaea
AT5G39520 Arabidopsis thaliana
AT5G39530 Arabidopsis thaliana
ATR0564G445 Amborella trichopoda
Atru.chr8.322 Acer truncatum
AUR62018111 Chenopodium quinoa
AUR62034445 Chenopodium quinoa
BcaB06g27319 Brassica carinata
BcaB06g27320 Brassica carinata
BcaB06g27340 Brassica carinata
BcaB06g27341 Brassica carinata
BolC4t26178H Brassica oleracea
BolC4t26179H Brassica oleracea
BolC4t26180H Brassica oleracea
BolC6t37070H Brassica oleracea
BolC9t55376H Brassica oleracea
BraA04t16891Z Brassica rapa
BraA04t16892Z Brassica rapa
BraA04t16893Z Brassica rapa
BraA07t29702Z Brassica rapa
C04p45950 Brassica napus
C04p45960 Brassica napus
C04p45970 Brassica napus
C06p18570 Brassica napus
CAN.G206.176 Capsicum annuum
CAN.G979.5 Capsicum annuum
CARHR262760 Cardamine hirsuta
CARHR262800 Cardamine hirsuta
CARHR262810 Cardamine hirsuta
Carub.0007s3642 Capsella rubella
Carub.0007s3643 Capsella rubella
Ca_04848_v3 Cicer arietinum L.
Ca_04853_v3 Cicer arietinum L.
CBR_g46605 Chara braunii
CBR_g51334 Chara braunii
Cc07_g03630 Coffea canephora
CDE02G0918 Ceratophyllum demersum
Ciclev10012515m.g Citrus clementina
ClCG09G017980 Citrullus lanatus
ClCG10G015310 Citrullus lanatus
COL.COLO4_12225 Corchorus olitorius
Cpa.g.sc14.113 Carica papaya
CsaV3_3G041190 Cucumis sativus L.
CsaV3_5G038250 Cucumis sativus L.
CSS0015906 Camellia sinensis var. sinensis
CSS0019671 Camellia sinensis var. sinensis
CSS0036969 Camellia sinensis var. sinensis
DCAR_011079 Daucus carota
Dinv11505 Davidia involucrata
Duzib147G0992 Durio zibethinus
ECA232G2753 Erigeron canadensis
EL10Ac2g03019 Beta vulgaris
Eucgr.I02016 Eucalyptus grandis
FAN02G2928 Fragaria x ananassa
FAN05G5298 Fragaria x ananassa
FAN09G1794 Fragaria x ananassa
FAN14G3700 Fragaria x ananassa
FAN14G4990 Fragaria x ananassa
FvH4_6g48000 Fragaria vesca
FvH4_6g48001 Fragaria vesca
Glyma.13G060852 Glycine max
Glyma.13G061800 Glycine max
Glyma.19G025600 Glycine max
Gohir.A07G206700 Gossypium hirsutum
Gohir.D07G212700 Gossypium hirsutum
Gohir.D11G074550 Gossypium hirsutum
Gorai.001G240700 Gossypium raimondii
Gorai.007G080000 Gossypium raimondii
GSVIVG01011460001 Vitis vinifera
HanXRQChr15g0487741 Helianthus annuus
Hma1.2p1_0409F.1_g146710 Hydrangea macrophylla
Hund15587 Selenicereus undatus
Lalb_Chr06g0175181 Lupinus albus
Lj1g0021452 Lotus japonicus
Lj2g0001860 Lotus japonicus
Lj2g0002943 Lotus japonicus
Lj2g0016815 Lotus japonicus
Lj2g0019349 Lotus japonicus
Lj3A346G23 Lonicera japonica
Lj3A350G16 Lonicera japonica
Lj3A352G14 Lonicera japonica
Lj3A364T22 Lonicera japonica
Lj3A367T10 Lonicera japonica
Lj3A369T15 Lonicera japonica
Lj4P113T24 Lonicera japonica
Lj8A426T27 Lonicera japonica
Lj8A428G27 Lonicera japonica
Lsat_1_v5_gn_4_169740 Lactuca sativa
Manes.02G048700 Manihot esculenta
Mapoly0033s0115 Marchantia polymorpha
MD09G1055000 Malus domestica
MD09G1055400 Malus domestica
MD17G1053100 Malus domestica
Medtr6g012830 Medicago truncatula
MELO3C009848.2 Cucumis melo
MELO3C033594.2 Cucumis melo
Migut.H00677 Erythranthe guttata
MSTRG.23916 Avicennia marina
Nitab4.5_0000212g0090 Nicotiana tabacum
Nitab4.5_0000568g0170 Nicotiana tabacum
Nitab4.5_0001591g0160 Nicotiana tabacum
Nitab4.5_0010283g0010 Nicotiana tabacum
Nn4g23269 Nelumbo nucifera
Oeu010226.1 Olea europaea
Oeu010227.1 Olea europaea
Os03g0168300 Oryza sativa ssp. japonica
Os07g0633000 Oryza sativa ssp. japonica
Os10g0580600 Oryza sativa ssp. japonica
Peaxi162Scf00166g01050 Petunia axillaris
Peaxi162Scf00629g00121 Petunia axillaris
PGR004G0346 Punica granatum
PGR083G1063 Punica granatum
PGSC0003DMG400025136 Solanum tuberosum
PGSC0003DMG401001341 Solanum tuberosum
PGSC0003DMG402001341 Solanum tuberosum
Phvul.004G029700 Phaseolus vulgaris
Phvul.004G031400 Phaseolus vulgaris
Potri.017G087500 Populus trichocarpa
PRCOL_00004285 Prasinoderma coloniale
Prupe.3G263500 Prunus persica
Psat1g070480 Pisum sativum
Psat1g071840 Pisum sativum
PSO017G4463 Papaver somniferum
PSO478G0939 Papaver somniferum
QL02p084825 Quercus lobata
QL02p084854 Quercus lobata
QL02p084872 Quercus lobata
RcHm_v2.0_Chr2g0167241 Rosa chinensis
RcHm_v2.0_Chr2g0167251 Rosa chinensis
RcHm_v2.0_Chr2g0167291 Rosa chinensis
Rhsim10G0035800 Rhododendron simsii
Rhsim10G0035900 Rhododendron simsii
Sabra17G0077200 Salix brachista
SalBow1G5883 Salvia bowleyana
Sc10g0003430 Simmondsia chinensis
SEGI_32476 Sequoiadendron giganteum
SGA_v2.0_scaffold413G51175 Striga asiatica
Solyc02g067120.4 Solanum lycopersicum
Solyc02g088270.3 Solanum lycopersicum
Sopen02g016310 Solanum pennellii
Sopen02g032950 Solanum pennellii
Sp7g02430 Schrenkiella parvula
Sp7g02440 Schrenkiella parvula
TAR629G3302 Trochodendron aralioides
THA.LOC104805483 Tarenaya hassleriana
Thecc.04G087300 Theobroma cacao
Thhalv10027904m.g Eutrema salsugineum
Thhalv10028063m.g Eutrema salsugineum
TPR.G14395 Trifolium pratense
TPR.G26214 Trifolium pratense
TPR.G8805 Trifolium pratense
TWI34G0797 Tripterygium wilfordii
TWI34G1333 Tripterygium wilfordii
TWI60G1366 Tripterygium wilfordii
unitig_62.g23442 Utricularia gibba
VMungo0464G0566 Vigna mungo
Zm00001eb005260 Zea mays
Zm00001eb328430 Zea mays
Zm00001eb402430 Zea mays

User provided reference genes

Program Settings