Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p11070 Brassica napus
A06p21540 Brassica napus
A10p17820 Brassica napus
Aa31LG4G14540 Aethionema arabicum
Actinidia03061 Actinidia chinensis
Actinidia07136 Actinidia chinensis
Actinidia24099 Actinidia chinensis
Ah.01g002880 Amaranthus hybridus
Ah.01g014350 Amaranthus hybridus
AL5G23790 Arabidopsis lyrata
AL8G37220 Arabidopsis lyrata
Aqoxy1G01243 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.70MDEI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.86U5T6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D47N05 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H0Z3H2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P4NYDW Arachis hypogaea
AT3G45230 Arabidopsis thaliana
AT5G60630 Arabidopsis thaliana
Atru.chr3.3633 Acer truncatum
BcaB01g01101 Brassica carinata
BcaB01g04664 Brassica carinata
BcaB08g36360 Brassica carinata
BcaC01g01980 Brassica carinata
BcaC04g19723 Brassica carinata
BolC3t13742H Brassica oleracea
BolC3t19246H Brassica oleracea
BraA03t10421Z Brassica rapa
BraA06t25239Z Brassica rapa
BraA10t43861Z Brassica rapa
C03p12760 Brassica napus
C03p69850 Brassica napus
C09p53350 Brassica napus
CAN.G631.25 Capsicum annuum
CAN.G920.1 Capsicum annuum
CANSAT54G2412 Cannabis sativa
CANSAT56G2191 Cannabis sativa
CARHR150740 Cardamine hirsuta
CARHR274310 Cardamine hirsuta
Carub.0005s1101 Capsella rubella
Carub.0008s2131 Capsella rubella
Ca_01416_v3 Cicer arietinum L.
Ca_05256_v3 Cicer arietinum L.
Cc01_g11150 Coffea canephora
Cfa011320 Carpinus fangiana
Ciclev10029471m.g Citrus clementina
CiPaw.13G112700 Carya illinoinensis
CiPaw.14G080400 Carya illinoinensis
ClCG02G021140 Citrullus lanatus
ClCG03G002160 Citrullus lanatus
Cpa.g.sc216.12 Carica papaya
CsaV3_1G012810 Cucumis sativus L.
CsaV3_6G013900 Cucumis sativus L.
DCAR_006061 Daucus carota
DCAR_006440 Daucus carota
DCAR_006441 Daucus carota
Dinv32748 Davidia involucrata
Duzib150G1311 Durio zibethinus
Duzib168G0960 Durio zibethinus
Duzib170G0015 Durio zibethinus
ECA233G4889 Erigeron canadensis
ECA238G3112 Erigeron canadensis
ECA248G2476 Erigeron canadensis
EL10Ac9g22513 Beta vulgaris
FAN11G3469 Fragaria x ananassa
FAN16G2082 Fragaria x ananassa
FAN21G0748 Fragaria x ananassa
FAN25G0660 Fragaria x ananassa
FvH4_3g32420 Fragaria vesca
Glyma.11G146900 Glycine max
Glyma.12G067800 Glycine max
Glyma.12G172900 Glycine max
Gohir.A03G034200 Gossypium hirsutum
Gohir.A05G102500 Gossypium hirsutum
Gohir.D03G134100 Gossypium hirsutum
Gohir.D05G102200 Gossypium hirsutum
Gorai.003G141200 Gossypium raimondii
Gorai.009G106500 Gossypium raimondii
HanXRQChr13g0403511 Helianthus annuus
Haze_23834 Corylus avellana
Hma1.2p1_0058F.1_g032570 Hydrangea macrophylla
Hma1.2p1_1031F.1_g250070 Hydrangea macrophylla
HPP92_008764 Vanilla planifolia
Lalb_Chr03g0027321 Lupinus albus
Lalb_Chr14g0374691 Lupinus albus
Lalb_Chr22g0350231 Lupinus albus
Lj2g0024305 Lotus japonicus
Lj3g0014225 Lotus japonicus
Lsat_1_v5_gn_1_65340 Lactuca sativa
Lsat_1_v5_gn_2_98481 Lactuca sativa
Lsat_1_v5_gn_6_46020 Lactuca sativa
Manes.04G021600 Manihot esculenta
Manes.07G101000 Manihot esculenta
Manes.11G144800 Manihot esculenta
Manes.14G162716 Manihot esculenta
Mapoly0127s0007 Marchantia polymorpha
MBI07_g19312_MAGBIO Magnolia biondii
MBI10_g41700_MAGBIO Magnolia biondii
Medtr2g094170 Medicago truncatula
Medtr3g049390 Medicago truncatula
Medtr4g059520 Medicago truncatula
Medtr4g459420 Medicago truncatula
MELO3C012432.2 Cucumis melo
MELO3C025771.2 Cucumis melo
MELO3C026856.2 Cucumis melo
Migut.D02222 Erythranthe guttata
Migut.D02278 Erythranthe guttata
Migut.N02602 Erythranthe guttata
MSTRG.17805 Avicennia marina
MSTRG.21125 Avicennia marina
Nitab4.5_0000181g0100 Nicotiana tabacum
Nitab4.5_0000650g0240 Nicotiana tabacum
Nitab4.5_0007218g0010 Nicotiana tabacum
Nitab4.5_0011114g0020 Nicotiana tabacum
Nitab4.5_0012712g0020 Nicotiana tabacum
Nn2g10783 Nelumbo nucifera
Nn2g13093 Nelumbo nucifera
Oeu001268.1 Olea europaea
Oeu002868.1 Olea europaea
Oeu030181.1 Olea europaea
Os03g0852400 Oryza sativa ssp. japonica
Peaxi162Scf00092g00152 Petunia axillaris
Peaxi162Scf00270g00089 Petunia axillaris
PGR102G1665 Punica granatum
PGSC0003DMG400008124 Solanum tuberosum
PGSC0003DMG400029164 Solanum tuberosum
Phvul.005G135700 Phaseolus vulgaris
Phvul.011G078900 Phaseolus vulgaris
Potri.004G210300 Populus trichocarpa
Potri.009G013500 Populus trichocarpa
Prupe.2G214100 Prunus persica
Prupe.6G101100 Prunus persica
Psat5g183560 Pisum sativum
Psat5g278280 Pisum sativum
Psat7g224760 Pisum sativum
PSO339G1636 Papaver somniferum
PSO384G1281 Papaver somniferum
RcHm_v2.0_Chr5g0059401 Rosa chinensis
Rhsim01G0217000 Rhododendron simsii
Rhsim01G0217100 Rhododendron simsii
Rhsim13G0094200 Rhododendron simsii
Sabra04G0141900 Salix brachista
Sabra09G0008000 Salix brachista
Sc06g0010170 Simmondsia chinensis
Sed0015663 Sechium edule
Sed0026517 Sechium edule
Solyc06g016790.3 Solanum lycopersicum
Solyc11g069390.1 Solanum lycopersicum
Sopen06g005740 Solanum pennellii
Sopen11g028110 Solanum pennellii
Sp5g16070 Schrenkiella parvula
Sp6g22190 Schrenkiella parvula
TAR629G0463 Trochodendron aralioides
TAR633G2264 Trochodendron aralioides
THA.LOC104799503 Tarenaya hassleriana
THA.LOC104810856 Tarenaya hassleriana
Thecc.09G340200 Theobroma cacao
Thhalv10002916m.g Eutrema salsugineum
Thhalv10015987m.g Eutrema salsugineum
TPR.G11601 Trifolium pratense
TPR.G15542 Trifolium pratense
TWI31G0432 Tripterygium wilfordii
TWI75G1406 Tripterygium wilfordii
TWI79G1650 Tripterygium wilfordii
unitig_27.g25059 Utricularia gibba
unitig_699.g19195 Utricularia gibba
unitig_736.g22415 Utricularia gibba
VMungo1080G0149 Vigna mungo
Zm00001eb064740 Zea mays

User provided reference genes

Program Settings