Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p08340 Brassica napus
A02p08350 Brassica napus
A10p15060 Brassica napus
Aa31LG3G13490 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis
Actinidia04122 Actinidia chinensis
Ah.08g214930 Amaranthus hybridus
Ah.14g083970 Amaranthus hybridus
AL8G33680 Arabidopsis lyrata
Aqoxy7G03142 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6S67WQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LBE3WY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea
AT5G57655 Arabidopsis thaliana
ATR0580G261 Amborella trichopoda
Atru.chr3.336 Acer truncatum
Atru.chr7.741 Acer truncatum
AUR62039990 Chenopodium quinoa
AUR62040296 Chenopodium quinoa
BcaB08g36123 Brassica carinata
BcaC01g06358 Brassica carinata
BcaC01g06364 Brassica carinata
BcaC03g14138 Brassica carinata
BcaC04g19942 Brassica carinata
BolC2t07527H Brassica oleracea
BolC8t49341H Brassica oleracea
BolC9t57806H Brassica oleracea
BraA02t05904Z Brassica rapa
BraA10t43588Z Brassica rapa
C02p14070 Brassica napus
C03p16540 Brassica napus
C08p17140 Brassica napus
C09p49530 Brassica napus
CAN.G584.24 Capsicum annuum
CANSAT11G0657 Cannabis sativa
CARHR271410 Cardamine hirsuta
Carub.0008s1816 Capsella rubella
Ca_21198_v3 Cicer arietinum L.
Cc06_g13640 Coffea canephora
CDE04G0897 Ceratophyllum demersum
Ciclev10008154m.g Citrus clementina
CiPaw.07G189100 Carya illinoinensis
CiPaw.08G037900 Carya illinoinensis
ClCG11G012460 Citrullus lanatus
COL.COLO4_09973 Corchorus olitorius
Cpa.g.sc75.2 Carica papaya
Cpa.g.sc95.75 Carica papaya
CsaV3_2G008080 Cucumis sativus L.
CSS0041373 Camellia sinensis var. sinensis
DCAR_014710 Daucus carota
DCAR_017956 Daucus carota
Dinv41278 Davidia involucrata
Dinv42759 Davidia involucrata
Dinv43343 Davidia involucrata
Duzib034G0005 Durio zibethinus
Duzib114G0309 Durio zibethinus
Duzib128G0608 Durio zibethinus
ECA236G4107 Erigeron canadensis
EL10Ac2g04384 Beta vulgaris
EL10Ac8g18262 Beta vulgaris
Eucgr.G01193 Eucalyptus grandis
FAN07G2198 Fragaria x ananassa
FAN12G1387 Fragaria x ananassa
FAN17G2491 Fragaria x ananassa
FAN22G1241 Fragaria x ananassa
FvH4_4g32520 Fragaria vesca
Glyma.17G066200 Glycine max
Gohir.A05G280700 Gossypium hirsutum
Gohir.A06G175800 Gossypium hirsutum
Gohir.D05G282700 Gossypium hirsutum
Gohir.D06G185466 Gossypium hirsutum
Gorai.009G296100 Gossypium raimondii
Gorai.010G217000 Gossypium raimondii
GSVIVG01029114001 Vitis vinifera
HanXRQChr05g0136751 Helianthus annuus
HanXRQChr09g0269751 Helianthus annuus
Haze_22131 Corylus avellana
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla
HPP92_013702 Vanilla planifolia
Hund09010 Selenicereus undatus
Hund26412 Selenicereus undatus
Lalb_Chr11g0072331 Lupinus albus
Lj4g0000380 Lotus japonicus
Lj9A689G39 Lonicera japonica
Lsat_1_v5_gn_8_66460 Lactuca sativa
Lsat_1_v5_gn_9_37000 Lactuca sativa
Manes.02G134800 Manihot esculenta
Manes.06G027600 Manihot esculenta
Mapoly0030s0071 Marchantia polymorpha
MBI04_g12481_MAGBIO Magnolia biondii
MBI14_g39543_MAGBIO Magnolia biondii
MCO08G279 Micromonas commoda
MD13G1264900 Malus domestica
MD13G1265000 Malus domestica
MD16G1265900 Malus domestica
Medtr4g128840 Medicago truncatula
MELO3C004075.2 Cucumis melo
Migut.J01448 Erythranthe guttata
Migut.K00260 Erythranthe guttata
MSTRG.19694 Avicennia marina
Nitab4.5_0000244g0180 Nicotiana tabacum
Nitab4.5_0001212g0070 Nicotiana tabacum
Nn2g12639 Nelumbo nucifera
Oeu052240.1 Olea europaea
Oeu054233.2 Olea europaea
Os07g0669100 Oryza sativa ssp. japonica
Peaxi162Scf00075g01415 Petunia axillaris
Peaxi162Scf00942g00127 Petunia axillaris
PGSC0003DMG400027477 Solanum tuberosum
Phvul.003G148700 Phaseolus vulgaris
Potri.018G096049 Populus trichocarpa
Pp3c6_6020 Physcomitrium patens
PRCOL_00002845 Prasinoderma coloniale
Prupe.1G091900 Prunus persica
Psat0ss9363g0320 Pisum sativum
PSO063G2639 Papaver somniferum
PSO782G1691 Papaver somniferum
QL02p096850 Quercus lobata
RcHm_v2.0_Chr4g0403601 Rosa chinensis
RcHm_v2.0_Chr5g0036521 Rosa chinensis
RcHm_v2.0_Chr5g0046871 Rosa chinensis
Rhsim01G0008400 Rhododendron simsii
Rhsim01G0008600 Rhododendron simsii
RhsimUnG0079500 Rhododendron simsii
RhsimUnG0079700 Rhododendron simsii
SalBow6G1169 Salvia bowleyana
SalBow6G2747 Salvia bowleyana
SalBow6G3740 Salvia bowleyana
SalBow7G3706 Salvia bowleyana
SalBow8G3820 Salvia bowleyana
Sc08g0005470 Simmondsia chinensis
Sc14g0005990 Simmondsia chinensis
Sed0027081 Sechium edule
SEGI_15575 Sequoiadendron giganteum
SEGI_36533 Sequoiadendron giganteum
SEGI_37950 Sequoiadendron giganteum
SGA_v2.0_scaffold66G22476 Striga asiatica
SGA_v2.0_scaffold69G23283 Striga asiatica
SMO181G0029 Selaginella moellendorffii
SMO259G0020 Selaginella moellendorffii
Solyc07g006650.4 Solanum lycopersicum
Sopen07g002760 Solanum pennellii
Sp6g19340 Schrenkiella parvula
TAR383G0623 Trochodendron aralioides
TAR625G0733 Trochodendron aralioides
TAR636G1430 Trochodendron aralioides
THA.LOC104813530 Tarenaya hassleriana
Thecc.10G167400 Theobroma cacao
Thhalv10013406m.g Eutrema salsugineum
TPR.G5301 Trifolium pratense
TWI32G0580 Tripterygium wilfordii
TWI34G1113 Tripterygium wilfordii
unitig_26.g9078 Utricularia gibba
vmacro13097 Vaccinium macrocarpon
VMungo1215G1034 Vigna mungo
Zm00001eb059010 Zea mays
Zm00001eb101000 Zea mays
Zm00001eb111020 Zea mays
Zm00001eb140760 Zea mays
Zm00001eb194710 Zea mays
Zm00001eb265380 Zea mays
Zm00001eb330180 Zea mays
Zm00001eb347580 Zea mays
Zm00001eb349350 Zea mays

User provided reference genes

Program Settings