Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p32830 Brassica napus
Aa31LG9G12410 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.241 Anthoceros agrestis
Actinidia06768 Actinidia chinensis
Ah.02g113080 Amaranthus hybridus
Ah.13g077000 Amaranthus hybridus
AL5G23710 Arabidopsis lyrata
AL8G19320 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.97XRIQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AT8ALT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D4REW6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JTH4ZG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M3R4HC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2A6R9 Arachis hypogaea
AT3G45180 Arabidopsis thaliana
AT5G42300 Arabidopsis thaliana
ATR0665G147 Amborella trichopoda
Atru.chr12.761 Acer truncatum
Atru.chr12.785 Acer truncatum
Atru.chr2.1290 Acer truncatum
Atru.chr3.3614 Acer truncatum
AUR62024961 Chenopodium quinoa
AUR62035681 Chenopodium quinoa
AUR62042195 Chenopodium quinoa
BcaB02g08018 Brassica carinata
BcaB04g20523 Brassica carinata
BcaC09g49169 Brassica carinata
BolC1t04148H Brassica oleracea
BraA01t03406Z Brassica rapa
C01p41920 Brassica napus
CAN.G219.65 Capsicum annuum
CANSAT56G0430 Cannabis sativa
CANSAT56G0757 Cannabis sativa
CANSAT56G0833 Cannabis sativa
CANSAT56G3079 Cannabis sativa
CARHR150790 Cardamine hirsuta
CARHR284900 Cardamine hirsuta
Carub.0008s0690 Capsella rubella
Ca_16404_v3 Cicer arietinum L.
Ca_16412_v3 Cicer arietinum L.
CBR_g26311 Chara braunii
Cc01_g11050 Coffea canephora
CDE06G0371 Ceratophyllum demersum
Cfa011309 Carpinus fangiana
Ciclev10033494m.g Citrus clementina
CiPaw.13G114000 Carya illinoinensis
ClCG01G013620 Citrullus lanatus
ClCG08G007540 Citrullus lanatus
COL.COLO4_18323 Corchorus olitorius
Cpa.g.sc3.475 Carica papaya
Cpa.g.sc53.87 Carica papaya
Cpa.g.sc65.3 Carica papaya
Cre17.g725050 Chlamydomonas reinhardtii
CsaV3_1G014010 Cucumis sativus L.
CsaV3_6G036470 Cucumis sativus L.
CSS0007140 Camellia sinensis var. sinensis
CSS0014649 Camellia sinensis var. sinensis
CSS0037040 Camellia sinensis var. sinensis
DCAR_018804 Daucus carota
DCAR_019101 Daucus carota
Duzib106G2042 Durio zibethinus
Duzib114G0898 Durio zibethinus
Duzib128G1839 Durio zibethinus
Duzib170G0173 Durio zibethinus
ECA238G0827 Erigeron canadensis
EL10Ac6g13388 Beta vulgaris
EL10Ac6g15231 Beta vulgaris
EL10Ac9g22532 Beta vulgaris
Eucgr.J00924 Eucalyptus grandis
FAN02G1153 Fragaria x ananassa
FAN02G3659 Fragaria x ananassa
FAN05G1209 Fragaria x ananassa
FAN09G4380 Fragaria x ananassa
FAN11G0673 Fragaria x ananassa
FAN14G0292 Fragaria x ananassa
FAN16G0267 Fragaria x ananassa
FAN25G3531 Fragaria x ananassa
FvH4_3g32020 Fragaria vesca
FvH4_6g15950 Fragaria vesca
Glyma.13G221100 Glycine max
Glyma.15G091400 Glycine max
Gohir.A06G167700 Gossypium hirsutum
Gohir.A08G198700 Gossypium hirsutum
Gohir.A10G205366 Gossypium hirsutum
Gohir.D06G175000 Gossypium hirsutum
Gohir.D06G175100 Gossypium hirsutum
Gohir.D08G216100 Gossypium hirsutum
Gorai.004G230000 Gossypium raimondii
Gorai.010G205400 Gossypium raimondii
Gorai.010G205500 Gossypium raimondii
HanXRQChr14g0452711 Helianthus annuus
HanXRQChr16g0532931 Helianthus annuus
HPP92_005153 Vanilla planifolia
HPP92_028504 Vanilla planifolia
Lalb_Chr15g0086671 Lupinus albus
Lalb_Chr18g0055181 Lupinus albus
Lj3g0017390 Lotus japonicus
Lsat_1_v5_gn_1_64121 Lactuca sativa
Lsat_1_v5_gn_2_112360 Lactuca sativa
Manes.08G007500 Manihot esculenta
Manes.09G068300 Manihot esculenta
Manes.11G146400 Manihot esculenta
Mapoly0065s0096 Marchantia polymorpha
Mapoly0159s0011 Marchantia polymorpha
MBI10_g21920_MAGBIO Magnolia biondii
MCO15G432 Micromonas commoda
MD03G1119300 Malus domestica
MD04G1097200 Malus domestica
MD12G1118400 Malus domestica
Medtr3g084140 Medicago truncatula
MELO3C019800.2 Cucumis melo
MELO3C035361.2 Cucumis melo
Migut.D02230 Erythranthe guttata
Migut.N02593 Erythranthe guttata
Nitab4.5_0000707g0150 Nicotiana tabacum
Nitab4.5_0004053g0030 Nicotiana tabacum
Nitab4.5_0009422g0020 Nicotiana tabacum
Nn2g10813 Nelumbo nucifera
Nn2g13109 Nelumbo nucifera
Nn3g19559 Nelumbo nucifera
Oeu013466.1 Olea europaea
Oeu056307.1 Olea europaea
Os02g0628800 Oryza sativa ssp. japonica
Os11g0145400 Oryza sativa ssp. japonica
Os12g0143100 Oryza sativa ssp. japonica
Peaxi162Scf00694g00018 Petunia axillaris
PGR142G3512 Punica granatum
Phvul.006G167900 Phaseolus vulgaris
Potri.004G211600 Populus trichocarpa
Potri.008G039100 Populus trichocarpa
Potri.010G223100 Populus trichocarpa
Pp3c3_27450 Physcomitrium patens
Prupe.6G102700 Prunus persica
Prupe.6G236300 Prunus persica
Psat5g100120 Pisum sativum
PSO063G1298 Papaver somniferum
PSO339G1327 Papaver somniferum
PSO339G3297 Papaver somniferum
PSO384G0873 Papaver somniferum
QL01p021954 Quercus lobata
QL07p044373 Quercus lobata
QL07p044403 Quercus lobata
RcHm_v2.0_Chr3g0469651 Rosa chinensis
Rhsim03G0120100 Rhododendron simsii
Rhsim09G0151300 Rhododendron simsii
Sabra08G0026800 Salix brachista
Sabra10G0172500 Salix brachista
Sc15g0001480 Simmondsia chinensis
Sc20g0001810 Simmondsia chinensis
Sed0000683 Sechium edule
Sed0011709 Sechium edule
SEGI_23705 Sequoiadendron giganteum
SGA_v2.0_scaffold93G28322 Striga asiatica
SMO347G0051 Selaginella moellendorffii
Solyc01g087620.3 Solanum lycopersicum
Sopen01g034590 Solanum pennellii
Sp7g08300 Schrenkiella parvula
TAR369G0716 Trochodendron aralioides
TAR623G0434 Trochodendron aralioides
THA.LOC109117042 Tarenaya hassleriana
THA.LOC109117094 Tarenaya hassleriana
Thecc.09G341900 Theobroma cacao
Thecc.10G075300 Theobroma cacao
Thhalv10002757m.g Eutrema salsugineum
TPR.G11596 Trifolium pratense
TPR.G25376 Trifolium pratense
TWI53G0713 Tripterygium wilfordii
vmacro04867 Vaccinium macrocarpon
vmacro07069 Vaccinium macrocarpon

User provided reference genes

Program Settings