Gene: AT5G42300

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G42300
  • Transcript Identifier AT5G42300.1
  • Gene Type Coding gene
  • Location Chr5 : 16913611-16913832 : negative

Gene Family Information

  • ID HOM05D004184
  • #Genes/#Species 169/85
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G42300.1
  • symbol UBL5
  • uniprot Q9FGZ9

Descriptions

  • Description ubiquitin-like protein 5
  • Computational description ubiquitin-like protein 5 (UBL5); CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626), Ubiquitin supergroup (InterPro:IPR019955); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT3G45180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
IMP
Gene OntologyRNA splicing1
GO:0006464
IEA
GOA Databasecellular protein modification process
GO:0006464
IBA
Gene Ontologycellular protein modification process2
GO:0006464
IEA
InterProcellular protein modification process
GO:0000398
IBA
Gene OntologymRNA splicing, via spliceosome2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding
GO:0031386
IBA
Gene Ontologyprotein tag2

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM, IBA
Gene Ontologycytoplasm2
GO:0005634
IDA
IBA
Gene Ontologynucleus1 2
GO:0005829
IDA
Gene Ontologycytosol1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029071 Ubiquitin-like domain superfamily
IPR000626 Ubiquitin-like domain
IPR039732 Ubiquitin-like modifier Hub1/Ubl5
Mapman id Description
19.2.2.4.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.HUB conjugation.ubiquitin-fold protein (HUB)