Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p52810 Brassica napus
A08p15120 Brassica napus
Actinidia01934 Actinidia chinensis
Actinidia05580 Actinidia chinensis
Ah.14g088950 Amaranthus hybridus
AL7G32480 Arabidopsis lyrata
AL7G32490 Arabidopsis lyrata
Aqoxy1G02747 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IP4RNA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YND711 Arachis hypogaea
AT4G21534 Arabidopsis thaliana
AT4G21540 Arabidopsis thaliana
ATR0693G103 Amborella trichopoda
Atru.chr10.2000 Acer truncatum
AUR62014726 Chenopodium quinoa
AUR62016908 Chenopodium quinoa
BcaB03g11691 Brassica carinata
BcaC01g00694 Brassica carinata
BcaC06g30667 Brassica carinata
BcaNung00852 Brassica carinata
BcaNung00853 Brassica carinata
BolC3t20608H Brassica oleracea
BolC7t45624H Brassica oleracea
BraA03t14357Z Brassica rapa
BraA08t33492Z Brassica rapa
C03p83270 Brassica napus
C07p51250 Brassica napus
CAN.G1181.22 Capsicum annuum
CAN.G289.28 Capsicum annuum
CAN.G446.12 Capsicum annuum
CAN.G450.4 Capsicum annuum
CAN.G491.5 Capsicum annuum
CAN.G84.27 Capsicum annuum
CANSAT56G2709 Cannabis sativa
CARHR228200 Cardamine hirsuta
CARHR228210 Cardamine hirsuta
Carub.0007s1987 Capsella rubella
Carub.0007s1988 Capsella rubella
Ca_00256_v3 Cicer arietinum L.
CBR_g30282 Chara braunii
Cc02_g12520 Coffea canephora
CDE05G0007 Ceratophyllum demersum
CDE05G1825 Ceratophyllum demersum
Ciclev10015071m.g Citrus clementina
CiPaw.09G158600 Carya illinoinensis
ClCG00G002960 Citrullus lanatus
ClCG01G022660 Citrullus lanatus
COL.COLO4_31573 Corchorus olitorius
Cpa.g.sc1170.1 Carica papaya
Cre12.g530550 Chlamydomonas reinhardtii
CsaV3_6G049850 Cucumis sativus L.
CSS0038663 Camellia sinensis var. sinensis
DCAR_024886 Daucus carota
DCAR_024887 Daucus carota
DCAR_028122 Daucus carota
Dinv39813 Davidia involucrata
Dinv40500 Davidia involucrata
Duzib235G1328 Durio zibethinus
ECA234G4776 Erigeron canadensis
ECA248G3644 Erigeron canadensis
EL10Ac8g20615 Beta vulgaris
Eucgr.E03468 Eucalyptus grandis
Eucgr.E03472 Eucalyptus grandis
FAN11G1228 Fragaria x ananassa
FAN16G2426 Fragaria x ananassa
FAN21G0123 Fragaria x ananassa
FAN25G2335 Fragaria x ananassa
FvH4_3g04090 Fragaria vesca
Glyma.08G058400 Glycine max
Glyma.13G246000 Glycine max
Glyma.15G067800 Glycine max
Gohir.A05G165100 Gossypium hirsutum
Gohir.A10G020600 Gossypium hirsutum
Gohir.D05G168100 Gossypium hirsutum
Gohir.D10G021400 Gossypium hirsutum
Gorai.009G173200 Gossypium raimondii
Gorai.011G022500 Gossypium raimondii
GSVIVG01003211001 Vitis vinifera
HanXRQChr01g0005541 Helianthus annuus
HanXRQChr16g0517801 Helianthus annuus
Haze_06566 Corylus avellana
HPP92_000922 Vanilla planifolia
HPP92_001807 Vanilla planifolia
HPP92_001808 Vanilla planifolia
Hund23626 Selenicereus undatus
Lalb_Chr05g0218191 Lupinus albus
Lalb_Chr18g0059921 Lupinus albus
Lalb_Chr20g0122261 Lupinus albus
Lj1A1212T59 Lonicera japonica
Lj4g0017719 Lotus japonicus
Lj6g0015878 Lotus japonicus
Lsat_1_v5_gn_1_126440 Lactuca sativa
Lsat_1_v5_gn_4_57180 Lactuca sativa
Manes.16G021200 Manihot esculenta
Mapoly0139s0005 Marchantia polymorpha
MBI16_g27830_MAGBIO Magnolia biondii
MBI18_g07595_MAGBIO Magnolia biondii
MCO01G720 Micromonas commoda
MCO02G016 Micromonas commoda
MD05G1324800 Malus domestica
MD05G1324900 Malus domestica
MD10G1302700 Malus domestica
Medtr2g011820 Medicago truncatula
MELO3C007311.2 Cucumis melo
Migut.I00179 Erythranthe guttata
Migut.M01205 Erythranthe guttata
MSTRG.15928 Avicennia marina
Nitab4.5_0003465g0060 Nicotiana tabacum
Nitab4.5_0003574g0080 Nicotiana tabacum
Nitab4.5_0007109g0030 Nicotiana tabacum
Nitab4.5_0021410g0010 Nicotiana tabacum
Nn1g03915 Nelumbo nucifera
Nn1g06749 Nelumbo nucifera
Oeu053937.2 Olea europaea
Os01g0782200 Oryza sativa ssp. japonica
Os07g0563000 Oryza sativa ssp. japonica
Peaxi162Scf00137g00128 Petunia axillaris
Peaxi162Scf00588g00910 Petunia axillaris
PGR042G0018 Punica granatum
PGSC0003DMG400005056 Solanum tuberosum
PGSC0003DMG400022361 Solanum tuberosum
Phvul.002G222800 Phaseolus vulgaris
Phvul.006G191800 Phaseolus vulgaris
Potri.011G043500 Populus trichocarpa
Pp3c10_6970 Physcomitrium patens
Pp3c1_27360 Physcomitrium patens
PRCOL_00005757 Prasinoderma coloniale
Prupe.4G036200 Prunus persica
Psat1g208320 Pisum sativum
PSO675G5031 Papaver somniferum
QL03p053022 Quercus lobata
QL05p081898 Quercus lobata
RcHm_v2.0_Chr5g0006561 Rosa chinensis
RcHm_v2.0_Chr5g0007951 Rosa chinensis
Sabra11G0030100 Salix brachista
Sc05g0008050 Simmondsia chinensis
Sc05g0010010 Simmondsia chinensis
Sed0001897 Sechium edule
SEGI_01037 Sequoiadendron giganteum
SEGI_19486 Sequoiadendron giganteum
SGA_v2.0_scaffold1019G53794 Striga asiatica
SGA_v2.0_scaffold114G31970 Striga asiatica
SMO361G0397 Selaginella moellendorffii
Solyc02g079030.3 Solanum lycopersicum
Solyc03g006630.3 Solanum lycopersicum
Sopen02g023840 Solanum pennellii
Sopen03g002640 Solanum pennellii
Sp7g19650 Schrenkiella parvula
Sp7g19660 Schrenkiella parvula
TAR624G0327 Trochodendron aralioides
TAR626G0914 Trochodendron aralioides
TAR626G1911 Trochodendron aralioides
THA.LOC104806277 Tarenaya hassleriana
Thecc.06G198200 Theobroma cacao
Thecc.07G164700 Theobroma cacao
Thhalv10025046m.g Eutrema salsugineum
Thhalv10025052m.g Eutrema salsugineum
TPR.G31521 Trifolium pratense
TPR.G36758 Trifolium pratense
TWI63G1567 Tripterygium wilfordii
unitig_37.g12341 Utricularia gibba
vmacro03824 Vaccinium macrocarpon
VMungo0251G0350 Vigna mungo
VMungo0540G2164 Vigna mungo
Zm00001eb106910 Zea mays
Zm00001eb135180 Zea mays
Zm00001eb309690 Zea mays
Zm00001eb324260 Zea mays
Zm00001eb367080 Zea mays

User provided reference genes

Program Settings