Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p20680 Brassica napus
A10p30070 Brassica napus
Aa31LG5G17260 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.478 Anthoceros agrestis
Actinidia07535 Actinidia chinensis
Ah.04g164220 Amaranthus hybridus
AL3G42790 Arabidopsis lyrata
AL6G16350 Arabidopsis lyrata
Aqoxy6G00116 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.681ID1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7MCX13 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B7AHJA Arachis hypogaea
AT2G04395 Arabidopsis thaliana
AT2G05210 Arabidopsis thaliana
AT5G06310 Arabidopsis thaliana
ATR0594G087 Amborella trichopoda
ATR1149G147 Amborella trichopoda
Atru.chr1.59 Acer truncatum
Atru.chr9.1709 Acer truncatum
Atru.chr9.1725 Acer truncatum
AUR62013945 Chenopodium quinoa
AUR62019586 Chenopodium quinoa
AUR62037555 Chenopodium quinoa
BcaB07g30993 Brassica carinata
BcaC04g21892 Brassica carinata
BcaC06g32364 Brassica carinata
BolC9t55513H Brassica oleracea
BolC9t59794H Brassica oleracea
BraA09t37672Z Brassica rapa
BraA10t45047Z Brassica rapa
C09p26100 Brassica napus
C09p70490 Brassica napus
CAN.G660.38 Capsicum annuum
CANSAT54G2092 Cannabis sativa
CANSAT78G2305 Cannabis sativa
CANSAT80G1525 Cannabis sativa
CARHR103050 Cardamine hirsuta
CARHR207050 Cardamine hirsuta
Carub.0003s2670 Capsella rubella
Carub.0006s0520 Capsella rubella
Ca_17185_v3 Cicer arietinum L.
CBR_g32246 Chara braunii
CBR_g34767 Chara braunii
Cc04_g06230 Coffea canephora
Cc07_g00810 Coffea canephora
CDE02G0891 Ceratophyllum demersum
CDE11G0199 Ceratophyllum demersum
Cfa011869 Carpinus fangiana
Cfa019653 Carpinus fangiana
Cfa023195 Carpinus fangiana
Ciclev10005180m.g Citrus clementina
Ciclev10008209m.g Citrus clementina
CiPaw.09G010700 Carya illinoinensis
CiPaw.09G010800 Carya illinoinensis
CiPaw.15G143600 Carya illinoinensis
ClCG04G010610 Citrullus lanatus
COL.COLO4_00261 Corchorus olitorius
COL.COLO4_05717 Corchorus olitorius
Cpa.g.sc10.94 Carica papaya
CsaV3_1G007180 Cucumis sativus L.
CSS0046385 Camellia sinensis var. sinensis
DCAR_003065 Daucus carota
Dinv08781 Davidia involucrata
Dinv27223 Davidia involucrata
Dinv32093 Davidia involucrata
Duzib205G1017 Durio zibethinus
ECA238G4801 Erigeron canadensis
EL10Ac4g08358 Beta vulgaris
Eucgr.B00998 Eucalyptus grandis
FAN02G1371 Fragaria x ananassa
FAN02G2531 Fragaria x ananassa
FAN05G0184 Fragaria x ananassa
FAN09G1804 Fragaria x ananassa
FAN14G2905 Fragaria x ananassa
FvH4_6g53500 Fragaria vesca
Glyma.05G246600 Glycine max
Glyma.08G054800 Glycine max
Gohir.A07G073600 Gossypium hirsutum
Gohir.A12G191000 Gossypium hirsutum
Gohir.D07G078300 Gossypium hirsutum
Gohir.D12G193100 Gossypium hirsutum
Gorai.001G082700 Gossypium raimondii
Gorai.008G207900 Gossypium raimondii
GSVIVG01008445001 Vitis vinifera
HanXRQChr14g0447361 Helianthus annuus
Haze_09240 Corylus avellana
Haze_18859 Corylus avellana
Hma1.2p1_0013F.1_g007880 Hydrangea macrophylla
Hma1.2p1_3150F.1_g333200 Hydrangea macrophylla
HPP92_005316 Vanilla planifolia
HPP92_005324 Vanilla planifolia
HPP92_005364 Vanilla planifolia
Hund17739 Selenicereus undatus
Lalb_Chr05g0221631 Lupinus albus
Lalb_Chr09g0330361 Lupinus albus
Lj1g0024684 Lotus japonicus
Lj5C158G4 Lonicera japonica
Lsat_1_v5_gn_2_63961 Lactuca sativa
Manes.06G005900 Manihot esculenta
Mapoly0002s0230 Marchantia polymorpha
MBI07_g11051_MAGBIO Magnolia biondii
MBI08_g04930_MAGBIO Magnolia biondii
MCO05G023 Micromonas commoda
MD06G1227400 Malus domestica
MD13G1006200 Malus domestica
Medtr8g107380 Medicago truncatula
MELO3C002134.2 Cucumis melo
Migut.D01539 Erythranthe guttata
MSTRG.9305 Avicennia marina
Nitab4.5_0000869g0150 Nicotiana tabacum
Nitab4.5_0001756g0030 Nicotiana tabacum
Nitab4.5_0005963g0070 Nicotiana tabacum
Nn3g21925 Nelumbo nucifera
Nn4g24245 Nelumbo nucifera
Oeu011444.1 Olea europaea
Oeu046631.1 Olea europaea
Peaxi162Scf00050g02313 Petunia axillaris
Peaxi162Scf00420g00077 Petunia axillaris
PGR083G0911 Punica granatum
PGSC0003DMG400021171 Solanum tuberosum
Phvul.002G330500 Phaseolus vulgaris
Potri.012G046400 Populus trichocarpa
Pp3c18_21900 Physcomitrium patens
Prupe.5G233900 Prunus persica
Psat4g000200 Pisum sativum
Psat7g001120 Pisum sativum
PSO210G3845 Papaver somniferum
PSO339G4834 Papaver somniferum
PSO513G0134 Papaver somniferum
PSO832G0101 Papaver somniferum
QL10p029785 Quercus lobata
QL10p030172 Quercus lobata
RcHm_v2.0_Chr7g0178331 Rosa chinensis
Rhsim02G0000200 Rhododendron simsii
Rhsim08G0126500 Rhododendron simsii
Sabra12G0032500 Salix brachista
SalBow3G1690 Salvia bowleyana
SalBow3G1953 Salvia bowleyana
Sc04g0004810 Simmondsia chinensis
Sed0019203 Sechium edule
SEGI_28626 Sequoiadendron giganteum
SEGI_33776 Sequoiadendron giganteum
SGA_v2.0_scaffold172G39016 Striga asiatica
SHI19078 Sapria himalayana
SHI19079 Sapria himalayana
Solyc02g070300.4 Solanum lycopersicum
Sopen02g019390 Solanum pennellii
Sp6g08970 Schrenkiella parvula
Sp6g36540 Schrenkiella parvula
TAR371G1103 Trochodendron aralioides
TAR636G2328 Trochodendron aralioides
THA.LOC104810218 Tarenaya hassleriana
THA.LOC104812555 Tarenaya hassleriana
THA.LOC104826807 Tarenaya hassleriana
Thecc.03G055600 Theobroma cacao
Thhalv10013532m.g Eutrema salsugineum
Thhalv10028628m.g Eutrema salsugineum
TPR.G1445 Trifolium pratense
TWI75G0727 Tripterygium wilfordii
TWI81G0681 Tripterygium wilfordii
unitig_22.g6151 Utricularia gibba
unitig_90.g27442 Utricularia gibba
vmacro09753 Vaccinium macrocarpon
vmacro09754 Vaccinium macrocarpon
VMungo0251G0610 Vigna mungo
VMungo0251G2472 Vigna mungo
VMungo0464G1157 Vigna mungo
VMungo0464G1805 Vigna mungo
Zm00001eb433700 Zea mays

User provided reference genes

Program Settings