Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p23300 Brassica napus
A06p05890 Brassica napus
A06p19850 Brassica napus
A06p26680 Brassica napus
A08p03240 Brassica napus
A08p06640 Brassica napus
A09p33570 Brassica napus
A10p16420 Brassica napus
Aa31LG4G13420 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.375 Anthoceros agrestis
Ah.15g099170 Amaranthus hybridus
AL5G21540 Arabidopsis lyrata
Aqoxy1G00551 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J94639 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JMUS5L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SF9HJV Arachis hypogaea
AT3G43610 Arabidopsis thaliana
ATR0697G020 Amborella trichopoda
Atru.chr3.3014 Acer truncatum
AUR62001591 Chenopodium quinoa
AUR62020189 Chenopodium quinoa
BcaB01g00875 Brassica carinata
BcaB02g10777 Brassica carinata
BcaB05g23088 Brassica carinata
BcaC01g01775 Brassica carinata
BcaC01g02217 Brassica carinata
BcaC06g36511 Brassica carinata
BolC3t19498H Brassica oleracea
BolC4t26312H Brassica oleracea
BolC8t48007H Brassica oleracea
BolSC21t60233H Brassica oleracea
BraA05t21194Z Brassica rapa
BraA06t25067Z Brassica rapa
BraA06t25600Z Brassica rapa
BraA07t28462Z Brassica rapa
BraA09t38674Z Brassica rapa
C03p72000 Brassica napus
C04p47150 Brassica napus
C05p34090 Brassica napus
C06p15540 Brassica napus
C08p23060 Brassica napus
CAN.G439.18 Capsicum annuum
CANSAT54G2785 Cannabis sativa
CARHR108670 Cardamine hirsuta
CARHR108680 Cardamine hirsuta
CARHR108980 Cardamine hirsuta
CARHR148440 Cardamine hirsuta
CARHR148450 Cardamine hirsuta
CARHR148460 Cardamine hirsuta
CARHR148720 Cardamine hirsuta
CARHR289540 Cardamine hirsuta
Carub.0005s0933 Capsella rubella
Carub.0005s0934 Capsella rubella
Carub.0005s0948 Capsella rubella
Ca_24340_v3 Cicer arietinum L.
CBR_g23077 Chara braunii
Cc00_g06190 Coffea canephora
CDE07G1769 Ceratophyllum demersum
Cfa010235 Carpinus fangiana
Ciclev10027694m.g Citrus clementina
CiPaw.13G126900 Carya illinoinensis
ClCG05G010880 Citrullus lanatus
COL.COLO4_25330 Corchorus olitorius
Cpa.g.sc103.96 Carica papaya
Cpa.g.sc103.97 Carica papaya
CsaV3_3G017640 Cucumis sativus L.
CSS0002631 Camellia sinensis var. sinensis
CSS0008927 Camellia sinensis var. sinensis
CSS0019415 Camellia sinensis var. sinensis
CSS0039701 Camellia sinensis var. sinensis
CSS0039756 Camellia sinensis var. sinensis
Dinv32838 Davidia involucrata
Duzib168G1551 Durio zibethinus
ECA233G2337 Erigeron canadensis
EL10Ac7g16248 Beta vulgaris
Eucgr.B03795 Eucalyptus grandis
Eucgr.B03796 Eucalyptus grandis
FAN11G3429 Fragaria x ananassa
FAN12G2472 Fragaria x ananassa
FAN16G3212 Fragaria x ananassa
FAN17G2621 Fragaria x ananassa
FAN22G0787 Fragaria x ananassa
FvH4_3g27030 Fragaria vesca
FvH4_3g27031 Fragaria vesca
FvH4_4g33990 Fragaria vesca
Glyma.01G244400 Glycine max
Gohir.A05G076400 Gossypium hirsutum
Gohir.D05G079200 Gossypium hirsutum
Gorai.009G080700 Gossypium raimondii
GSVIVG01022379001 Vitis vinifera
HanXRQChr03g0089821 Helianthus annuus
Haze_23626 Corylus avellana
Haze_23627 Corylus avellana
Haze_23628 Corylus avellana
Hma1.2p1_0218F.1_g092390 Hydrangea macrophylla
Hma1.2p1_2711F.1_g327330 Hydrangea macrophylla
HPP92_019532 Vanilla planifolia
HPP92_019533 Vanilla planifolia
Hund18819 Selenicereus undatus
Lalb_Chr16g0376251 Lupinus albus
Lj1g0011831 Lotus japonicus
Lj2A891G11 Lonicera japonica
Lsat_1_v5_gn_5_4320 Lactuca sativa
Lsat_1_v5_gn_5_75780 Lactuca sativa
Manes.04G054800 Manihot esculenta
Mapoly0099s0003 Marchantia polymorpha
MBI11_g07705_MAGBIO Magnolia biondii
MCO07G649 Micromonas commoda
MD03G1162300 Malus domestica
MD03G1162400 Malus domestica
MD11G1178600 Malus domestica
Medtr5g004880 Medicago truncatula
MELO3C020298.2 Cucumis melo
Migut.D00721 Erythranthe guttata
MSTRG.21311 Avicennia marina
Nitab4.5_0000615g0090 Nicotiana tabacum
Nitab4.5_0000615g0100 Nicotiana tabacum
Nitab4.5_0005222g0040 Nicotiana tabacum
Nn2g14486 Nelumbo nucifera
Oeu048810.1 Olea europaea
Os04g0566800 Oryza sativa ssp. japonica
Os04g0566900 Oryza sativa ssp. japonica
Peaxi162Scf00217g00627 Petunia axillaris
PGR102G2778 Punica granatum
Phvul.002G053700 Phaseolus vulgaris
Potri.009G153300 Populus trichocarpa
Pp3c11_24620 Physcomitrium patens
Prupe.6G151400 Prunus persica
Psat3g010920 Pisum sativum
Psat4g228400 Pisum sativum
Psat6g175800 Pisum sativum
PSO339G2294 Papaver somniferum
PSO384G5014 Papaver somniferum
QL01p018674 Quercus lobata
RcHm_v2.0_Chr5g0049541 Rosa chinensis
RcHm_v2.0_Chr6g0285361 Rosa chinensis
Rhsim13G0199700 Rhododendron simsii
SalBow6G3333 Salvia bowleyana
Sc06g0008560 Simmondsia chinensis
Sed0012220 Sechium edule
SEGI_18042 Sequoiadendron giganteum
SEGI_35526 Sequoiadendron giganteum
SGA_v2.0_scaffold29G12109 Striga asiatica
SHI25291 Sapria himalayana
SHI25292 Sapria himalayana
SHI25294 Sapria himalayana
SHI25295 Sapria himalayana
SHI25296 Sapria himalayana
SMO172G0086 Selaginella moellendorffii
Solyc11g071570.3 Solanum lycopersicum
Sopen11g029250 Solanum pennellii
Sp5g17550 Schrenkiella parvula
TAR623G1397 Trochodendron aralioides
THA.LOC104815063 Tarenaya hassleriana
Thecc.09G266000 Theobroma cacao
Thhalv10002374m.g Eutrema salsugineum
Thhalv10029231m.g Eutrema salsugineum
TPR.G26857 Trifolium pratense
TWI60G0836 Tripterygium wilfordii
unitig_21.g20311 Utricularia gibba
unitig_21.g20312 Utricularia gibba
vmacro04062 Vaccinium macrocarpon
vmacro04063 Vaccinium macrocarpon
VMungo1215G0285 Vigna mungo
VMungo1215G1724 Vigna mungo
Zm00001eb043190 Zea mays
Zm00001eb073760 Zea mays
Zm00001eb254140 Zea mays
Zm00001eb328610 Zea mays
Zm00001eb428880 Zea mays

User provided reference genes

Program Settings