Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p32660 Brassica napus
A05p26300 Brassica napus
Aa31LG8G8990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis
Actinidia36959 Actinidia chinensis
Actinidia40147 Actinidia chinensis
Actinidia40148 Actinidia chinensis
Ah.04g154580 Amaranthus hybridus
AL5G12050 Arabidopsis lyrata
AL7G40920 Arabidopsis lyrata
AL7G43460 Arabidopsis lyrata
AL7G43530 Arabidopsis lyrata
Aqoxy2G03389 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea
AT3G22425 Arabidopsis thaliana
AT4G14910 Arabidopsis thaliana
ATR0661G018 Amborella trichopoda
ATR0697G231 Amborella trichopoda
Atru.ctg752_3.80 Acer truncatum
AUR62033623 Chenopodium quinoa
AUR62034751 Chenopodium quinoa
BcaB02g07851 Brassica carinata
BcaB04g20518 Brassica carinata
BcaB06g26344 Brassica carinata
BcaC05g28070 Brassica carinata
BcaC09g49174 Brassica carinata
BolC1t04138H Brassica oleracea
BolC5t32835H Brassica oleracea
BraA01t03394Z Brassica rapa
C01p41840 Brassica napus
C05p40930 Brassica napus
CAN.G490.3 Capsicum annuum
CANSAT78G2043 Cannabis sativa
CARHR098330 Cardamine hirsuta
CARHR221500 Cardamine hirsuta
CARHR221520 Cardamine hirsuta
Carub.0003s2260 Capsella rubella
Carub.0007s2719 Capsella rubella
Ca_10902_v3 Cicer arietinum L.
Ca_26329_v3 Cicer arietinum L.
CBR_g48324 Chara braunii
Cc03_g03750 Coffea canephora
CDE07G0326 Ceratophyllum demersum
Cfa015643 Carpinus fangiana
Cfa024592 Carpinus fangiana
Ciclev10005599m.g Citrus clementina
CiPaw.01G165700 Carya illinoinensis
CiPaw.02G097200 Carya illinoinensis
ClCG06G006210 Citrullus lanatus
COL.COLO4_04735 Corchorus olitorius
Cpa.g.sc58.111 Carica papaya
Cre02.g103850 Chlamydomonas reinhardtii
CsaV3_7G022530 Cucumis sativus L.
CSS0002625 Camellia sinensis var. sinensis
CSS0012312 Camellia sinensis var. sinensis
CSS0016260 Camellia sinensis var. sinensis
CSS0029286 Camellia sinensis var. sinensis
CSS0040239 Camellia sinensis var. sinensis
DCAR_002386 Daucus carota
DCAR_027216 Daucus carota
Dinv13992 Davidia involucrata
Dinv44535 Davidia involucrata
Duzib052G0532 Durio zibethinus
ECA238G3454 Erigeron canadensis
EL10Ac1g01312 Beta vulgaris
Eucgr.H03482 Eucalyptus grandis
FAN07G1942 Fragaria x ananassa
FAN12G1931 Fragaria x ananassa
FAN17G0737 Fragaria x ananassa
FAN22G1640 Fragaria x ananassa
FvH4_4g15510 Fragaria vesca
Glyma.20G145900 Glycine max
Gohir.A09G215700 Gossypium hirsutum
Gohir.D09G218200 Gossypium hirsutum
Gorai.006G239100 Gossypium raimondii
GSVIVG01017973001 Vitis vinifera
HanXRQChr09g0265721 Helianthus annuus
HanXRQChr14g0432251 Helianthus annuus
Haze_00903 Corylus avellana
Haze_03894 Corylus avellana
Haze_27397 Corylus avellana
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla
HPP92_026352 Vanilla planifolia
Hund12131 Selenicereus undatus
Lalb_Chr10g0096121 Lupinus albus
Lalb_Chr17g0338611 Lupinus albus
Lj2g0010828 Lotus japonicus
Lj3A735T49 Lonicera japonica
Lj5g0002897 Lotus japonicus
Lj6A608T71 Lonicera japonica
Lsat_1_v5_gn_2_31480 Lactuca sativa
Manes.03G178800 Manihot esculenta
Mapoly0095s0045 Marchantia polymorpha
MBI06_g26001_MAGBIO Magnolia biondii
MBI06_g37250_MAGBIO Magnolia biondii
MCO15G615 Micromonas commoda
MD13G1192800 Malus domestica
MD16G1193500 Malus domestica
Medtr1g071390 Medicago truncatula
Medtr1g103820 Medicago truncatula
Medtr8g045710 Medicago truncatula
MELO3C012647.2 Cucumis melo
Migut.N00183 Erythranthe guttata
MSTRG.21855 Avicennia marina
Nitab4.5_0000043g0130 Nicotiana tabacum
Nitab4.5_0001560g0020 Nicotiana tabacum
Nn4g26636 Nelumbo nucifera
Oeu031232.1 Olea europaea
Oeu050278.3 Olea europaea
Os04g0617800 Oryza sativa ssp. japonica
Peaxi162Scf00092g01021 Petunia axillaris
PGR004G1517 Punica granatum
PGSC0003DMG400030085 Solanum tuberosum
Phvul.007G057200 Phaseolus vulgaris
Phvul.007G275100 Phaseolus vulgaris
Potri.008G152701 Populus trichocarpa
Potri.010G087600 Populus trichocarpa
Pp3c13_21930 Physcomitrium patens
PRCOL_00007017 Prasinoderma coloniale
Prupe.1G013300 Prunus persica
Psat4g223320 Pisum sativum
Psat6g050360 Pisum sativum
Psat6g050400 Pisum sativum
Psat6g207600 Pisum sativum
PSO210G3182 Papaver somniferum
PSO832G0920 Papaver somniferum
QL06p002509 Quercus lobata
RcHm_v2.0_Chr4g0416251 Rosa chinensis
Rhsim02G0024100 Rhododendron simsii
Rhsim02G0024200 Rhododendron simsii
Rhsim02G0024500 Rhododendron simsii
Rhsim02G0024700 Rhododendron simsii
Rhsim02G0024800 Rhododendron simsii
Rhsim02G0025000 Rhododendron simsii
Rhsim02G0025100 Rhododendron simsii
Rhsim02G0025200 Rhododendron simsii
Rhsim07G0200200 Rhododendron simsii
Rhsim08G0128300 Rhododendron simsii
Sabra08G0116300 Salix brachista
Sabra10G0055200 Salix brachista
SalBow3G1121 Salvia bowleyana
Sc10g0004960 Simmondsia chinensis
Sed0010859 Sechium edule
Sed0017770 Sechium edule
SEGI_10012 Sequoiadendron giganteum
SGA_v2.0_scaffold10G05080 Striga asiatica
SGA_v2.0_scaffold20G09126 Striga asiatica
SHI00436 Sapria himalayana
SMO367G0933 Selaginella moellendorffii
Solyc09g076020.3 Solanum lycopersicum
Sopen09g030850 Solanum pennellii
Sp3g20190 Schrenkiella parvula
Sp7g13050 Schrenkiella parvula
TAR365G0475 Trochodendron aralioides
TAR636G0642 Trochodendron aralioides
THA.LOC104808545 Tarenaya hassleriana
Thecc.04G231800 Theobroma cacao
Thhalv10021310m.g Eutrema salsugineum
Thhalv10025980m.g Eutrema salsugineum
TPR.G34563 Trifolium pratense
TPR.G5464 Trifolium pratense
TWI15G0835 Tripterygium wilfordii
VMungo0720G0383 Vigna mungo
VMungo0720G1944 Vigna mungo
Zm00001eb070570 Zea mays

User provided reference genes

Program Settings