Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08410 Brassica napus
A03p59020 Brassica napus
A07p05710 Brassica napus
Aa31LG2G20850 Aethionema arabicum
Actinidia29901 Actinidia chinensis
Ah.06g192090 Amaranthus hybridus
AL7G22590 Arabidopsis lyrata
Aqoxy7G01214 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0E9UWZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.0IF9U9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5R9G89 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N5J773 Arachis hypogaea
AT4G29720 Arabidopsis thaliana
ATR0749G083 Amborella trichopoda
Atru.chr7.1588 Acer truncatum
Atru.chr7.1589 Acer truncatum
AUR62027508 Chenopodium quinoa
AUR62033975 Chenopodium quinoa
BcaB02g10925 Brassica carinata
BcaB03g15636 Brassica carinata
BcaC03g17034 Brassica carinata
BcaC09g51749 Brassica carinata
BcaC09g52222 Brassica carinata
BcaNung00484 Brassica carinata
BolC1t00935H Brassica oleracea
BolC2t11029H Brassica oleracea
BolC7t46178H Brassica oleracea
BraA01t00789Z Brassica rapa
BraA03t14962Z Brassica rapa
C01p09740 Brassica napus
C02p49430 Brassica napus
C07p57070 Brassica napus
CAN.G1241.23 Capsicum annuum
CAN.G1785.2 Capsicum annuum
CAN.G1785.3 Capsicum annuum
CAN.G25.8 Capsicum annuum
CAN.G4193.1 Capsicum annuum
CANSAT25G0955 Cannabis sativa
CANSAT56G0788 Cannabis sativa
CARHR237570 Cardamine hirsuta
Carub.0007s1080 Capsella rubella
Cc06_g11400 Coffea canephora
CDE02G3235 Ceratophyllum demersum
Cfa003086 Carpinus fangiana
Ciclev10007864m.g Citrus clementina
CiPaw.03G216100 Carya illinoinensis
CiPaw.04G149300 Carya illinoinensis
ClCG11G001760 Citrullus lanatus
COL.COLO4_18200 Corchorus olitorius
Cpa.g.sc61.52 Carica papaya
CsaV3_2G001470 Cucumis sativus L.
DCAR_010678 Daucus carota
DCAR_011972 Daucus carota
Dinv36766 Davidia involucrata
Dinv42319 Davidia involucrata
Duzib150G0164 Durio zibethinus
Duzib168G1590 Durio zibethinus
ECA082G0001 Erigeron canadensis
ECA234G4608 Erigeron canadensis
ECA240G0409 Erigeron canadensis
EL10Ac8g19219 Beta vulgaris
Eucgr.C00897 Eucalyptus grandis
FAN01G2766 Fragaria x ananassa
FAN03G1185 Fragaria x ananassa
FAN06G2956 Fragaria x ananassa
FAN10G0602 Fragaria x ananassa
FvH4_7g01430 Fragaria vesca
Glyma.09G063000 Glycine max
Glyma.13G104100 Glycine max
Glyma.15G169600 Glycine max
Glyma.17G055000 Glycine max
Gohir.A05G029900 Gossypium hirsutum
Gohir.A07G011100 Gossypium hirsutum
Gohir.D05G031300 Gossypium hirsutum
Gohir.D07G011175 Gossypium hirsutum
Gorai.001G011800 Gossypium raimondii
Gorai.009G031500 Gossypium raimondii
GSVIVG01015201001 Vitis vinifera
HanXRQChr03g0060801 Helianthus annuus
HanXRQChr09g0238121 Helianthus annuus
HanXRQChr10g0319311 Helianthus annuus
Haze_25913 Corylus avellana
Hma1.2p1_2664F.1_g326440 Hydrangea macrophylla
HPP92_003972 Vanilla planifolia
HPP92_003973 Vanilla planifolia
HPP92_024007 Vanilla planifolia
Lalb_Chr07g0180841 Lupinus albus
Lalb_Chr08g0232141 Lupinus albus
Lalb_Chr11g0074611 Lupinus albus
Lalb_Chr12g0199781 Lupinus albus
Lalb_Chr13g0299721 Lupinus albus
Lj6g0009922 Lotus japonicus
Lsat_1_v5_gn_7_37140 Lactuca sativa
Manes.03G033700 Manihot esculenta
Manes.16G102100 Manihot esculenta
Mapoly0103s0017 Marchantia polymorpha
MBI01_g16602_MAGBIO Magnolia biondii
MD01G1012400 Malus domestica
MD02G1079400 Malus domestica
MD15G1206900 Malus domestica
MD16G1255500 Malus domestica
Medtr2g039160 Medicago truncatula
MELO3C004624.2 Cucumis melo
Migut.J00618 Erythranthe guttata
Migut.L01492 Erythranthe guttata
MSTRG.10564 Avicennia marina
MSTRG.6061 Avicennia marina
Nitab4.5_0000095g0080 Nicotiana tabacum
Nitab4.5_0003310g0050 Nicotiana tabacum
Nitab4.5_0004978g0010 Nicotiana tabacum
Nitab4.5_0008523g0010 Nicotiana tabacum
Nitab4.5_0016456g0010 Nicotiana tabacum
Nn6g35478 Nelumbo nucifera
Nn8g38866 Nelumbo nucifera
Oeu006970.1 Olea europaea
Oeu042656.1 Olea europaea
Os01g0710200 Oryza sativa ssp. japonica
Peaxi162Scf00498g00033 Petunia axillaris
Peaxi162Scf01461g00001 Petunia axillaris
PGR142G4166 Punica granatum
PGSC0003DMG400000338 Solanum tuberosum
PGSC0003DMG400017833 Solanum tuberosum
PGSC0003DMG400021391 Solanum tuberosum
PGSC0003DMG400044110 Solanum tuberosum
Phvul.003G136900 Phaseolus vulgaris
Phvul.009G232400 Phaseolus vulgaris
Potri.006G151300 Populus trichocarpa
Prupe.7G209800 Prunus persica
Psat1g141360 Pisum sativum
PSO210G1393 Papaver somniferum
PSO210G4135 Papaver somniferum
QL01p049089 Quercus lobata
QL02p062674 Quercus lobata
RcHm_v2.0_Chr2g0093331 Rosa chinensis
Rhsim03G0232300 Rhododendron simsii
Sabra06G0119800 Salix brachista
SabraUnG0005600 Salix brachista
SalBow1G8305 Salvia bowleyana
SalBow6G6598 Salvia bowleyana
Sc08g0008470 Simmondsia chinensis
Sed0015676 Sechium edule
SEGI_19847 Sequoiadendron giganteum
SEGI_30114 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09380 Striga asiatica
SGA_v2.0_scaffold62G21608 Striga asiatica
SMO271G0058 Selaginella moellendorffii
Solyc03g007160.1 Solanum lycopersicum
Solyc05g018880.1 Solanum lycopersicum
Solyc07g039310.1 Solanum lycopersicum
Solyc12g008850.3 Solanum lycopersicum
Sopen05g016370 Solanum pennellii
Sopen07g018460 Solanum pennellii
Sopen12g003780 Solanum pennellii
Sp7g27490 Schrenkiella parvula
TAR383G0321 Trochodendron aralioides
TAR624G1353 Trochodendron aralioides
TAR636G0804 Trochodendron aralioides
THA.LOC104803973 Tarenaya hassleriana
THA.LOC104814620 Tarenaya hassleriana
Thecc.09G089400 Theobroma cacao
Thhalv10024841m.g Eutrema salsugineum
TPR.G27541 Trifolium pratense
TWI34G1056 Tripterygium wilfordii
TWI63G1616 Tripterygium wilfordii
vmacro06291 Vaccinium macrocarpon
vmacro17230 Vaccinium macrocarpon
vmacro17231 Vaccinium macrocarpon
vmacro17232 Vaccinium macrocarpon
VMungo1215G1868 Vigna mungo
VMungo1309G0774 Vigna mungo
Zm00001eb155140 Zea mays

User provided reference genes

Program Settings