Gene: Solyc07g039310.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g039310.1
  • Transcript Identifier Solyc07g039310.1.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 46739773-46741314 : positive

Gene Family Information

  • ID HOM05D004111
  • #Genes/#Species 171/88
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g039310.1.1
  • uniprot A0A3Q7HB95
  • gene_id Solyc07g039310

Descriptions

  • Description lysine-specific histone demethylase 1 homolog 1 (AHRD V3.3 *** A0A2I4HTG5_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT4G29720
GO:1903602
ISO
PLAZA Integrative Orthologythermospermine catabolic process Os01g0710200
GO:0046208
ISO
PLAZA Integrative Orthologyspermine catabolic process Os01g0710200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016491
IBA
IEA
GOA Databaseoxidoreductase activity
GO:0016491
IEA
InterProoxidoreductase activity
GO:0046592
IBA
GOA Databasepolyamine oxidase activity
GO:0052894
ISO
PLAZA Integrative Orthologynorspermine:oxygen oxidoreductase activity Os01g0710200
GO:1990534
ISO
PLAZA Integrative Orthologythermospermine oxidase activity AT4G29720
GO:0050660
ISO
PLAZA Integrative Orthologyflavin adenine dinucleotide binding Os01g0710200
GO:0052903
ISO
PLAZA Integrative OrthologyN1-acetylspermine:oxygen oxidoreductase (3-acetamidopropanal-forming) activity Os01g0710200
GO:0052901
ISO
PLAZA Integrative Orthologyspermine:oxygen oxidoreductase (spermidine-forming) activity Os01g0710200

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G29720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036188 FAD/NAD(P)-binding domain superfamily
IPR002937 Amine oxidase
Mapman id Description
8.5.2.3 Polyamine metabolism.polyamine degradation.FAD-dependent polyamine oxidase activities.polyamine oxidase (PAO5)