Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p09220 Brassica napus
A03p13590 Brassica napus
A10p13580 Brassica napus
Aa31LG3G12200 Aethionema arabicum
Actinidia30340 Actinidia chinensis
Actinidia35440 Actinidia chinensis
Actinidia37106 Actinidia chinensis
Ah.04g164860 Amaranthus hybridus
AL8G31920 Arabidopsis lyrata
Aqoxy4G02276 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.36GALV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FI1VU9 Arachis hypogaea
AT5G56290 Arabidopsis thaliana
ATR0751G081 Amborella trichopoda
Atru.chr2.3913 Acer truncatum
AUR62017764 Chenopodium quinoa
AUR62017765 Chenopodium quinoa
AUR62043123 Chenopodium quinoa
BcaB01g04390 Brassica carinata
BcaB05g22257 Brassica carinata
BcaB05g22258 Brassica carinata
BcaC01g06414 Brassica carinata
BcaC04g20111 Brassica carinata
BolC2t07653H Brassica oleracea
BolC3t14019H Brassica oleracea
BolC9t57610H Brassica oleracea
BraA03t10663Z Brassica rapa
BraA10t43460Z Brassica rapa
C02p15370 Brassica napus
C02p15380 Brassica napus
C03p15880 Brassica napus
C09p47570 Brassica napus
CAN.G492.64 Capsicum annuum
CANSAT11G1316 Cannabis sativa
CARHR269690 Cardamine hirsuta
Carub.0008s1661 Capsella rubella
Ca_14121_v3 Cicer arietinum L.
CBR_g45681 Chara braunii
Cc05_g15840 Coffea canephora
CDE05G2368 Ceratophyllum demersum
CDE05G2641 Ceratophyllum demersum
Cfa016972 Carpinus fangiana
Ciclev10007566m.g Citrus clementina
CiPaw.11G211200 Carya illinoinensis
ClCG00G000320 Citrullus lanatus
ClCG10G003580 Citrullus lanatus
COL.COLO4_07798 Corchorus olitorius
Cpa.g.sc12.49 Carica papaya
Cpa.g.sc12.51 Carica papaya
Cpa.g.sc12.52 Carica papaya
Cre14.g616750 Chlamydomonas reinhardtii
CsaV3_3G003580 Cucumis sativus L.
CSS0008075 Camellia sinensis var. sinensis
DCAR_016814 Daucus carota
DCAR_019936 Daucus carota
Dinv19633 Davidia involucrata
Dinv42526 Davidia involucrata
Duzib268G0918 Durio zibethinus
ECA246G1615 Erigeron canadensis
EL10Ac4g07494 Beta vulgaris
Eucgr.F01979 Eucalyptus grandis
FAN11G1160 Fragaria x ananassa
FAN16G0876 Fragaria x ananassa
FAN21G3119 Fragaria x ananassa
FAN25G0546 Fragaria x ananassa
FvH4_3g41350 Fragaria vesca
Glyma.04G116700 Glycine max
Glyma.06G320100 Glycine max
Gohir.1Z049406 Gossypium hirsutum
Gohir.1Z049433 Gossypium hirsutum
Gohir.1Z049490 Gossypium hirsutum
Gohir.1Z049608 Gossypium hirsutum
Gohir.A01G000401 Gossypium hirsutum
Gohir.A03G000002 Gossypium hirsutum
Gohir.A03G000007 Gossypium hirsutum
Gohir.A03G081400 Gossypium hirsutum
Gohir.A04G000400 Gossypium hirsutum
Gohir.A04G000600 Gossypium hirsutum
Gohir.A05G415601 Gossypium hirsutum
Gohir.A06G201500 Gossypium hirsutum
Gohir.A07G135000 Gossypium hirsutum
Gohir.A08G253600 Gossypium hirsutum
Gohir.A09G249700 Gossypium hirsutum
Gohir.A10G243600 Gossypium hirsutum
Gohir.A11G000300 Gossypium hirsutum
Gohir.A12G000850 Gossypium hirsutum
Gohir.A13G000950 Gossypium hirsutum
Gohir.D03G178425 Gossypium hirsutum
Gohir.D05G388750 Gossypium hirsutum
Gohir.D05G388800 Gossypium hirsutum
Gorai.009G455200 Gossypium raimondii
Gorai.009G455400 Gossypium raimondii
GSVIVG01014864001 Vitis vinifera
HanXRQChr05g0160701 Helianthus annuus
Haze_09929 Corylus avellana
Hma1.2p1_0321F.1_g124420 Hydrangea macrophylla
Hma1.2p1_0321F.1_g124430 Hydrangea macrophylla
Hma1.2p1_0321F.1_g124440 Hydrangea macrophylla
HPP92_017855 Vanilla planifolia
HPP92_017856 Vanilla planifolia
Hund01805 Selenicereus undatus
Lalb_Chr15g0079811 Lupinus albus
Lalb_Chr18g0048751 Lupinus albus
Lj3g0001916 Lotus japonicus
Lj8C185G3 Lonicera japonica
Lsat_1_v5_gn_2_71300 Lactuca sativa
Lsat_1_v5_gn_3_135720 Lactuca sativa
Lsat_1_v5_gn_3_67900 Lactuca sativa
Lsat_1_v5_gn_5_20540 Lactuca sativa
Lsat_1_v5_gn_5_241 Lactuca sativa
Lsat_1_v5_gn_6_79681 Lactuca sativa
Lsat_1_v5_gn_8_153381 Lactuca sativa
Lsat_1_v5_gn_8_35540 Lactuca sativa
Lsat_1_v5_gn_9_105500 Lactuca sativa
Manes.01G008000 Manihot esculenta
Manes.05G203450 Manihot esculenta
Mapoly0064s0022 Marchantia polymorpha
MBI15_g32219_MAGBIO Magnolia biondii
MCO05G026 Micromonas commoda
MD03G1045600 Malus domestica
MD11G1047800 Malus domestica
Medtr3g009230 Medicago truncatula
MELO3C014028.2 Cucumis melo
Migut.M01572 Erythranthe guttata
MSTRG.16125 Avicennia marina
MSTRG.7048 Avicennia marina
Nitab4.5_0000611g0190 Nicotiana tabacum
Nitab4.5_0004488g0010 Nicotiana tabacum
Nn2g14376 Nelumbo nucifera
Oeu052018.2 Olea europaea
Os08g0500100 Oryza sativa ssp. japonica
Peaxi162Scf00018g00064 Petunia axillaris
PGR083G2418 Punica granatum
PGSC0003DMG400011237 Solanum tuberosum
Phvul.005G006500 Phaseolus vulgaris
Potri.001G473100 Populus trichocarpa
Potri.011G170000 Populus trichocarpa
Pp3c14_5170 Physcomitrium patens
PRCOL_00000784 Prasinoderma coloniale
Prupe.6G036900 Prunus persica
Psat5g230760 Pisum sativum
PSO541G4185 Papaver somniferum
PSO675G3414 Papaver somniferum
QL08p000136 Quercus lobata
RcHm_v2.0_Chr5g0074241 Rosa chinensis
Rhsim04G0006500 Rhododendron simsii
Sabra11G0137000 Salix brachista
SalBow8G2465 Salvia bowleyana
Sc03g0011840 Simmondsia chinensis
Sed0000599 Sechium edule
SEGI_01359 Sequoiadendron giganteum
SEGI_20896 Sequoiadendron giganteum
SEGI_28507 Sequoiadendron giganteum
SGA_v2.0_scaffold7G03562 Striga asiatica
SMO361G0081 Selaginella moellendorffii
Solyc10g005650.3 Solanum lycopersicum
Sopen10g001620 Solanum pennellii
Sp6g18140 Schrenkiella parvula
TAR626G1397 Trochodendron aralioides
THA.LOC104813473 Tarenaya hassleriana
Thecc.07G000300 Theobroma cacao
Thhalv10012791m.g Eutrema salsugineum
TPR.G16705 Trifolium pratense
TPR.G8441 Trifolium pratense
TWI14G0432 Tripterygium wilfordii
TWI39G0299 Tripterygium wilfordii
unitig_749.g13703 Utricularia gibba
vmacro09791 Vaccinium macrocarpon
vmacro09792 Vaccinium macrocarpon
VMungo1080G0600 Vigna mungo
Zm00001eb034080 Zea mays
Zm00001eb199560 Zea mays

User provided reference genes

Program Settings