Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p12040 Brassica napus
A07p32530 Brassica napus
A10p06090 Brassica napus
Aa31LG7G6710 Aethionema arabicum
Aa31sc781G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2645 Anthoceros agrestis
Actinidia04781 Actinidia chinensis
Actinidia15016 Actinidia chinensis
Actinidia15017 Actinidia chinensis
Actinidia15018 Actinidia chinensis
Actinidia20697 Actinidia chinensis
Ah.02g130710 Amaranthus hybridus
AL1G40600 Arabidopsis lyrata
AL2G26080 Arabidopsis lyrata
Aqoxy5G03417 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.11CB4V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7LT28F Arachis hypogaea
AT1G24320 Arabidopsis thaliana
AT1G67490 Arabidopsis thaliana
ATR0561G059 Amborella trichopoda
Atru.chr11.2303 Acer truncatum
AUR62005598 Chenopodium quinoa
AUR62024129 Chenopodium quinoa
BcaB02g06725 Brassica carinata
BcaB03g13994 Brassica carinata
BcaB03g13996 Brassica carinata
BcaB03g15361 Brassica carinata
BcaC06g35272 Brassica carinata
BolC5t29329H Brassica oleracea
BolC6t38956H Brassica oleracea
BolC7t42308H Brassica oleracea
BraA07t28991Z Brassica rapa
BraA07t30877Z Brassica rapa
BraA10t42875Z Brassica rapa
C05p05580 Brassica napus
C06p38670 Brassica napus
C07p17980 Brassica napus
CAN.G1548.3 Capsicum annuum
CAN.G311.73 Capsicum annuum
CAN.G49.22 Capsicum annuum
CAN.G49.23 Capsicum annuum
CANSAT01G0794 Cannabis sativa
CARHR026770 Cardamine hirsuta
CARHR060060 Cardamine hirsuta
Carub.0001s2575 Capsella rubella
Carub.0002s1382 Capsella rubella
Ca_18044_v3 Cicer arietinum L.
Ca_18045_v3 Cicer arietinum L.
Ca_18046_v3 Cicer arietinum L.
Ca_18056_v3 Cicer arietinum L.
CBR_g11887 Chara braunii
Cc00_g13540 Coffea canephora
CDE05G0715 Ceratophyllum demersum
Cfa009333 Carpinus fangiana
Cfa024667 Carpinus fangiana
Ciclev10030695m.g Citrus clementina
CiPaw.05G112000 Carya illinoinensis
ClCG11G013780 Citrullus lanatus
COL.COLO4_20377 Corchorus olitorius
Cpa.g.sc1279.1 Carica papaya
Cpa.g.sc43.13 Carica papaya
Cpa.g.sc43.15 Carica papaya
Cpa.g.sc43.17 Carica papaya
Cre13.g579734 Chlamydomonas reinhardtii
CsaV3_5G030370 Cucumis sativus L.
CSS0021321 Camellia sinensis var. sinensis
CSS0033535 Camellia sinensis var. sinensis
DCAR_026468 Daucus carota
DCAR_031191 Daucus carota
Dinv14824 Davidia involucrata
Duzib248G1376 Durio zibethinus
Duzib251G0245 Durio zibethinus
ECA246G4064 Erigeron canadensis
EL10Ac6g13480 Beta vulgaris
Eucgr.B03480 Eucalyptus grandis
FAN07G0057 Fragaria x ananassa
FAN12G2099 Fragaria x ananassa
FAN17G1448 Fragaria x ananassa
FAN22G1343 Fragaria x ananassa
FvH4_4g23960 Fragaria vesca
Glyma.05G146400 Glycine max
Glyma.05G146500 Glycine max
Glyma.08G103167 Glycine max
Glyma.08G103233 Glycine max
Gohir.A01G155000 Gossypium hirsutum
Gohir.D01G154900 Gossypium hirsutum
Gorai.002G191800 Gossypium raimondii
GSVIVG01010441001 Vitis vinifera
HanXRQChr17g0540261 Helianthus annuus
Haze_12355 Corylus avellana
Haze_12390 Corylus avellana
Haze_12391 Corylus avellana
Hma1.2p1_0668F.1_g200000 Hydrangea macrophylla
HPP92_023192 Vanilla planifolia
Hund25455 Selenicereus undatus
Lalb_Chr13g0294221 Lupinus albus
Lalb_Chr13g0294231 Lupinus albus
Lj4g0020055 Lotus japonicus
Lj6C825T6 Lonicera japonica
Lsat_1_v5_gn_3_29780 Lactuca sativa
Manes.13G018100 Manihot esculenta
Mapoly0071s0095 Marchantia polymorpha
MBI11_g07450_MAGBIO Magnolia biondii
MD13G1116700 Malus domestica
MD16G1117300 Malus domestica
MD16G1117400 Malus domestica
Medtr8g080290 Medicago truncatula
Medtr8g080330 Medicago truncatula
Medtr8g080360 Medicago truncatula
MELO3C011876.2 Cucumis melo
Migut.K00711 Erythranthe guttata
MSTRG.7991 Avicennia marina
Nitab4.5_0002174g0010 Nicotiana tabacum
Nitab4.5_0002174g0020 Nicotiana tabacum
Nitab4.5_0005179g0010 Nicotiana tabacum
Nitab4.5_0005179g0020 Nicotiana tabacum
Nn4g22358 Nelumbo nucifera
Oeu019032.1 Olea europaea
Oeu036881.1 Olea europaea
Oeu036882.3 Olea europaea
Os01g0921200 Oryza sativa ssp. japonica
Peaxi162Scf00128g01139 Petunia axillaris
Peaxi162Scf00128g01140 Petunia axillaris
PGR102G2071 Punica granatum
Phvul.002G174800 Phaseolus vulgaris
Phvul.002G174901 Phaseolus vulgaris
Potri.010G059000 Populus trichocarpa
Pp3c11_13660 Physcomitrium patens
Prupe.1G228800 Prunus persica
Prupe.1G228900 Prunus persica
Psat7g078160 Pisum sativum
Psat7g078280 Pisum sativum
PSO017G2193 Papaver somniferum
PSO478G3686 Papaver somniferum
PSO675G1898 Papaver somniferum
PSO724G1248 Papaver somniferum
QL03p053766 Quercus lobata
RcHm_v2.0_Chr4g0430631 Rosa chinensis
RcHm_v2.0_Chr7g0216361 Rosa chinensis
Rhsim12G0102000 Rhododendron simsii
Sabra10G0046600 Salix brachista
Sabra10G0046700 Salix brachista
SalBow2G2696 Salvia bowleyana
Sc04g0010030 Simmondsia chinensis
Sed0007371 Sechium edule
SEGI_39835 Sequoiadendron giganteum
SGA_v2.0_scaffold130G34253 Striga asiatica
SHI17952 Sapria himalayana
SMO358G0259 Selaginella moellendorffii
Solyc05g015220.3 Solanum lycopersicum
Solyc05g015250.2 Solanum lycopersicum
Sopen05g010470 Solanum pennellii
Sp1g06290 Schrenkiella parvula
Sp1g23450 Schrenkiella parvula
Sp5g22470 Schrenkiella parvula
TAR629G3065 Trochodendron aralioides
THA.LOC104807884 Tarenaya hassleriana
Thecc.02G212500 Theobroma cacao
Thhalv10006835m.g Eutrema salsugineum
Thhalv10018104m.g Eutrema salsugineum
TPR.G17069 Trifolium pratense
TPR.G17087 Trifolium pratense
TPR.G36369 Trifolium pratense
TWI18G1202 Tripterygium wilfordii
TWI36G0618 Tripterygium wilfordii
TWI36G0648 Tripterygium wilfordii
unitig_22.g6408 Utricularia gibba
unitig_22.g6409 Utricularia gibba
VMungo0251G0768 Vigna mungo
VMungo0251G3103 Vigna mungo
VMungo0251G3132 Vigna mungo
Zm00001eb143210 Zea mays

User provided reference genes

Program Settings