Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26390 Brassica napus
A04p21360 Brassica napus
A07p18700 Brassica napus
Aa31LG5G7980 Aethionema arabicum
Actinidia07184 Actinidia chinensis
Actinidia24146 Actinidia chinensis
Ah.01g003340 Amaranthus hybridus
AL4G21990 Arabidopsis lyrata
Aqoxy2G01663 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H3UHY6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MIP29L Arachis hypogaea
AT2G28160 Arabidopsis thaliana
ATR0329G004 Amborella trichopoda
ATR0329G051 Amborella trichopoda
Atru.chr3.3512 Acer truncatum
Atru.chr3.3518 Acer truncatum
Atru.chr3.3519 Acer truncatum
Atru.chr3.3520 Acer truncatum
AUR62014973 Chenopodium quinoa
AUR62029160 Chenopodium quinoa
BcaB01g03093 Brassica carinata
BcaB02g10153 Brassica carinata
BcaB06g28191 Brassica carinata
BcaC01g04962 Brassica carinata
BcaC02g08204 Brassica carinata
BcaC02g10950 Brassica carinata
BolC3t15510H Brassica oleracea
BolC4t23837H Brassica oleracea
BolC4t27254H Brassica oleracea
BraA03t11854Z Brassica rapa
BraA04t17704Z Brassica rapa
BraA07t29581Z Brassica rapa
C03p31680 Brassica napus
C04p23350 Brassica napus
C04p57310 Brassica napus
CAN.G2082.3 Capsicum annuum
CAN.G246.1 Capsicum annuum
CANSAT54G0269 Cannabis sativa
CANSAT54G0298 Cannabis sativa
CARHR121010 Cardamine hirsuta
CARHR121030 Cardamine hirsuta
CARHR121040 Cardamine hirsuta
Carub.0004s0898 Capsella rubella
Ca_01707_v3 Cicer arietinum L.
Cc01_g10310 Coffea canephora
CDE04G2019 Ceratophyllum demersum
Cfa001699 Carpinus fangiana
Ciclev10029784m.g Citrus clementina
Ciclev10029810m.g Citrus clementina
Ciclev10030052m.g Citrus clementina
CiPaw.11G059100 Carya illinoinensis
ClCG02G021600 Citrullus lanatus
COL.COLO4_19192 Corchorus olitorius
Cpa.g.c28125.2 Carica papaya
CsaV3_6G014370 Cucumis sativus L.
CSS0015702 Camellia sinensis var. sinensis
CSS0026720 Camellia sinensis var. sinensis
CSS0042301 Camellia sinensis var. sinensis
CSS0048040 Camellia sinensis var. sinensis
DCAR_006116 Daucus carota
DCAR_006122 Daucus carota
DCAR_022765 Daucus carota
DCAR_032197 Daucus carota
Dinv16219 Davidia involucrata
Duzib170G1119 Durio zibethinus
ECA248G3340 Erigeron canadensis
EL10Ac9g22622 Beta vulgaris
Eucgr.B03931 Eucalyptus grandis
FAN11G2030 Fragaria x ananassa
FAN16G2177 Fragaria x ananassa
FAN21G0713 Fragaria x ananassa
FAN25G1486 Fragaria x ananassa
FvH4_3g30650 Fragaria vesca
FvH4_3g30660 Fragaria vesca
Glyma.11G192800 Glycine max
Glyma.12G081200 Glycine max
Glyma.12G178500 Glycine max
Glyma.13G322100 Glycine max
Gohir.A05G087000 Gossypium hirsutum
Gohir.A09G088800 Gossypium hirsutum
Gohir.D05G088200 Gossypium hirsutum
Gohir.D09G088575 Gossypium hirsutum
Gorai.006G105000 Gossypium raimondii
Gorai.009G090400 Gossypium raimondii
GSVIVG01031466001 Vitis vinifera
HanXRQChr01g0019641 Helianthus annuus
HanXRQChr11g0346541 Helianthus annuus
HanXRQChr11g0346551 Helianthus annuus
HanXRQChr11g0346601 Helianthus annuus
HanXRQChr11g0346631 Helianthus annuus
Haze_16835 Corylus avellana
Hma1.2p1_0772F.1_g216060 Hydrangea macrophylla
HPP92_023195 Vanilla planifolia
Hund01519 Selenicereus undatus
Lalb_Chr14g0374401 Lupinus albus
Lalb_Chr14g0374421 Lupinus albus
Lalb_Chr22g0350411 Lupinus albus
Lalb_Chr24g0394931 Lupinus albus
Lj2C1007G8 Lonicera japonica
Lj3g0002714 Lotus japonicus
Lj3g0003103 Lotus japonicus
Lsat_1_v5_gn_1_64640 Lactuca sativa
Manes.11G152300 Manihot esculenta
MBI13_g13834_MAGBIO Magnolia biondii
MD03G1127500 Malus domestica
MD03G1127600 Malus domestica
MD03G1129100 Malus domestica
Medtr2g084280 Medicago truncatula
Medtr4g057270 Medicago truncatula
MELO3C026952.2 Cucumis melo
Migut.D02289 Erythranthe guttata
Migut.D02290 Erythranthe guttata
Migut.N02544 Erythranthe guttata
MSTRG.18701 Avicennia marina
Nitab4.5_0000870g0060 Nicotiana tabacum
Nitab4.5_0001634g0050 Nicotiana tabacum
Nitab4.5_0001634g0060 Nicotiana tabacum
Nitab4.5_0001897g0030 Nicotiana tabacum
Nn2g13852 Nelumbo nucifera
Nn6g35225 Nelumbo nucifera
Nn6g35240 Nelumbo nucifera
Oeu007735.1 Olea europaea
Os04g0381700 Oryza sativa ssp. japonica
Peaxi162Scf00490g00018 Petunia axillaris
Peaxi162Scf00530g00031 Petunia axillaris
Peaxi162Scf00530g00063 Petunia axillaris
Peaxi162Scf00530g00066 Petunia axillaris
PGR102G0619 Punica granatum
PGSC0003DMG400019017 Solanum tuberosum
Phvul.005G130500 Phaseolus vulgaris
Phvul.011G086200 Phaseolus vulgaris
Potri.009G005600 Populus trichocarpa
Prupe.6G112500 Prunus persica
Prupe.6G112600 Prunus persica
Psat5g253480 Pisum sativum
Psat7g191640 Pisum sativum
PSO063G6410 Papaver somniferum
PSO339G2885 Papaver somniferum
PSO801G0107 Papaver somniferum
PSO801G0681 Papaver somniferum
PSO801G0814 Papaver somniferum
QL01p015070 Quercus lobata
RcHm_v2.0_Chr5g0056871 Rosa chinensis
RcHm_v2.0_Chr5g0056881 Rosa chinensis
Rhsim13G0100400 Rhododendron simsii
Sabra09G0002900 Salix brachista
SalBow3G2912 Salvia bowleyana
SalBow6G6360 Salvia bowleyana
Sc06g0010800 Simmondsia chinensis
Sed0002152 Sechium edule
Solyc06g051550.4 Solanum lycopersicum
Sopen06g017530 Solanum pennellii
Sp4g10970 Schrenkiella parvula
TAR369G1011 Trochodendron aralioides
TAR623G0825 Trochodendron aralioides
THA.LOC104800575 Tarenaya hassleriana
THA.LOC104826386 Tarenaya hassleriana
Thecc.09G298700 Theobroma cacao
Thhalv10016957m.g Eutrema salsugineum
TPR.G21029 Trifolium pratense
TPR.G21034 Trifolium pratense
TPR.G22181 Trifolium pratense
TPR.G36836 Trifolium pratense
TPR.G4257 Trifolium pratense
TWI75G1803 Tripterygium wilfordii
TWI79G0102 Tripterygium wilfordii
TWI79G0199 Tripterygium wilfordii
unitig_899.g15363 Utricularia gibba
vmacro03254 Vaccinium macrocarpon
VMungo1080G0687 Vigna mungo
VMungo1127G1339 Vigna mungo
Zm00001eb420910 Zea mays

User provided reference genes

Program Settings