Gene: AT2G28160

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G28160
  • Transcript Identifier AT2G28160.1
  • Gene Type Coding gene
  • Location Chr2 : 12004713-12005908 : positive

Gene Family Information

  • ID HOM05D004091
  • #Genes/#Species 172/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G28160.1
  • symbol FRU
  • Alias ATBHLH029,BASIC HELIX-LOOP-HELIX PROTEIN 29,ATBHLH29,BASIC HELIX-LOOP-HELIX PROTEIN 29,ATFIT1,ARABIDOPSIS FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1,BHLH029,BASIC HELIX-LOOP-HELIX PROTEIN 29,FIT1,FE-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 1
  • uniprot Q0V7X4

Descriptions

  • Description FER-like regulator of iron uptake
  • Computational description FER-like regulator of iron uptake (FRU); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of iron ion transport, response to cytokinin stimulus, response to iron ion, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G16910.1); Has 2366 Blast hits to 2362 proteins in 114 species: Archae - 2; Bacteria - 0; Metazoa - 3; Fungi - 9; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
TAS
Gene Ontologyregulation of transcription, DNA-templated1 2
GO:0010039
IMP
Gene Ontologyresponse to iron ion3
GO:0034756
IMP
Gene Ontologyregulation of iron ion transport4
GO:0055072
ISO
PLAZA Integrative Orthologyiron ion homeostasis Solyc06g051550.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
Gene Ontologyprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISS, IBA
Gene OntologyDNA-binding transcription factor activity1 2
GO:0005515
IPI
Gene Ontologyprotein binding5
GO:0043565
IBA
Gene Ontologysequence-specific DNA binding2
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM, IBA
Gene Ontologynucleus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 Helix-loop-helix DNA-binding domain superfamily
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
25.4.2.1.5 Nutrient uptake.metal homeostasis.iron.regulation.iron uptake regulator (FIT)