Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04540 Brassica napus
A03p62320 Brassica napus
A07p36390 Brassica napus
Aa31sc355G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3821 Anthoceros agrestis
Actinidia00355 Actinidia chinensis
Actinidia01168 Actinidia chinensis
Actinidia12283 Actinidia chinensis
Ah.01g007120 Amaranthus hybridus
AL2G29180 Arabidopsis lyrata
AL7G17680 Arabidopsis lyrata
Aqoxy3G03190 Aquilegia oxysepala
Aqoxy6G02440 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0DC02M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F53DZL Arachis hypogaea
AT1G69935 Arabidopsis thaliana
AT4G33780 Arabidopsis thaliana
ATR0739G081 Amborella trichopoda
Atru.chr11.1891 Acer truncatum
Atru.chr5.2274 Acer truncatum
AUR62030868 Chenopodium quinoa
BcaB03g14773 Brassica carinata
BcaC03g14363 Brassica carinata
BcaC08g46443 Brassica carinata
BcaC08g46444 Brassica carinata
BcaNung02921 Brassica carinata
BcaNung04326 Brassica carinata
BcaNung04672 Brassica carinata
BolC1t00476H Brassica oleracea
BolC2t07908H Brassica oleracea
BolC6t39453H Brassica oleracea
BolC7t46432H Brassica oleracea
BraA01t00439Z Brassica rapa
BraA03t15307Z Brassica rapa
BraA07t31211Z Brassica rapa
C01p04920 Brassica napus
C02p17780 Brassica napus
C02p17790 Brassica napus
C06p43810 Brassica napus
C07p59880 Brassica napus
CAN.G300.5 Capsicum annuum
CANSAT25G1673 Cannabis sativa
CARHR063040 Cardamine hirsuta
CARHR241870 Cardamine hirsuta
Carub.0002s1665 Capsella rubella
Carub.0007s0665 Capsella rubella
Ca_28186_v3 Cicer arietinum L.
Cc02_g20080 Coffea canephora
CDE04G2047 Ceratophyllum demersum
Cfa004696 Carpinus fangiana
Cfa009049 Carpinus fangiana
Ciclev10029333m.g Citrus clementina
Ciclev10032809m.g Citrus clementina
CiPaw.05G021000 Carya illinoinensis
CiPaw.06G078300 Carya illinoinensis
ClCG02G007130 Citrullus lanatus
COL.COLO4_32481 Corchorus olitorius
COL.COLO4_36242 Corchorus olitorius
Cpa.g.sc106.30 Carica papaya
Cpa.g.sc5.304 Carica papaya
CsaV3_7G007690 Cucumis sativus L.
CSS0031122 Camellia sinensis var. sinensis
CSS0038746 Camellia sinensis var. sinensis
DCAR_021942 Daucus carota
Dinv09536 Davidia involucrata
Dinv24938 Davidia involucrata
Duzib132G0587 Durio zibethinus
Duzib268G0252 Durio zibethinus
ECA236G0105 Erigeron canadensis
EL10Ac9g22175 Beta vulgaris
Eucgr.B02582 Eucalyptus grandis
Eucgr.G01187 Eucalyptus grandis
FAN15G0324 Fragaria x ananassa
FAN20G2318 Fragaria x ananassa
FAN24G1045 Fragaria x ananassa
FAN27G0771 Fragaria x ananassa
FvH4_2g03150 Fragaria vesca
Glyma.01G039100 Glycine max
Glyma.01G241400 Glycine max
Glyma.02G025600 Glycine max
Gohir.A04G096700 Gossypium hirsutum
Gohir.A13G047950 Gossypium hirsutum
Gohir.D04G136500 Gossypium hirsutum
Gorai.012G120300 Gossypium raimondii
GSVIVG01020122001 Vitis vinifera
GSVIVG01037047001 Vitis vinifera
HanXRQChr17g0551501 Helianthus annuus
Haze_10292 Corylus avellana
Haze_12080 Corylus avellana
Hma1.2p1_0289F.1_g114450 Hydrangea macrophylla
Hma1.2p1_0661F.1_g198070 Hydrangea macrophylla
Hund06503 Selenicereus undatus
Hund06504 Selenicereus undatus
Lalb_Chr05g0217411 Lupinus albus
Lj2g0011291 Lotus japonicus
Lj5A221T58 Lonicera japonica
Lsat_1_v5_gn_3_112521 Lactuca sativa
Lsat_1_v5_gn_5_182360 Lactuca sativa
Lsat_1_v5_gn_7_84781 Lactuca sativa
Lsat_1_v5_gn_9_118200 Lactuca sativa
Manes.05G094600 Manihot esculenta
Manes.10G087100 Manihot esculenta
Mapoly0011s0173 Marchantia polymorpha
MBI01_g41231_MAGBIO Magnolia biondii
MBI16_g37623_MAGBIO Magnolia biondii
MD05G1106700 Malus domestica
MD10G1111500 Malus domestica
Medtr0065s0080 Medicago truncatula
Medtr1g116050 Medicago truncatula
Medtr3g040420 Medicago truncatula
Medtr5g037230 Medicago truncatula
MELO3C018531.2 Cucumis melo
Migut.B00471 Erythranthe guttata
Nitab4.5_0000710g0070 Nicotiana tabacum
Nitab4.5_0000772g0090 Nicotiana tabacum
Nitab4.5_0002694g0080 Nicotiana tabacum
Nitab4.5_0009103g0030 Nicotiana tabacum
Nitab4.5_0013199g0010 Nicotiana tabacum
Nn1g03866 Nelumbo nucifera
Nn5g30675 Nelumbo nucifera
Oeu028917.1 Olea europaea
Os02g0531900 Oryza sativa ssp. japonica
Os03g0231900 Oryza sativa ssp. japonica
Peaxi162Scf00016g03121 Petunia axillaris
Peaxi162Scf00187g00617 Petunia axillaris
PGR042G2373 Punica granatum
PGR119G1273 Punica granatum
PGSC0003DMG400025835 Solanum tuberosum
Phvul.002G050600 Phaseolus vulgaris
Phvul.002G079300 Phaseolus vulgaris
Potri.001G289600 Populus trichocarpa
Potri.008G190900 Populus trichocarpa
Prupe.8G150800 Prunus persica
Psat2g117160 Pisum sativum
PSO017G3065 Papaver somniferum
PSO170G3120 Papaver somniferum
PSO591G0142 Papaver somniferum
PSO832G0995 Papaver somniferum
QL03p066700 Quercus lobata
QL11p029242 Quercus lobata
RcHm_v2.0_Chr6g0248281 Rosa chinensis
Rhsim12G0127500 Rhododendron simsii
RhsimUnG0040800 Rhododendron simsii
Sabra08G0144800 Salix brachista
Sabra16G0181200 Salix brachista
Sabra18G0047200 Salix brachista
SalBow6G0931 Salvia bowleyana
Sc05g0005570 Simmondsia chinensis
Sed0019763 Sechium edule
SGA_v2.0_scaffold32G12983 Striga asiatica
Solyc01g106810.4 Solanum lycopersicum
Solyc04g005120.3 Solanum lycopersicum
Sopen01g049120 Solanum pennellii
Sopen04g001140 Solanum pennellii
Sp5g25060 Schrenkiella parvula
Sp7g31520 Schrenkiella parvula
TAR622G0570 Trochodendron aralioides
THA.LOC104807209 Tarenaya hassleriana
THA.LOC104822080 Tarenaya hassleriana
Thecc.02G120300 Theobroma cacao
Thecc.02G236800 Theobroma cacao
Thhalv10019201m.g Eutrema salsugineum
Thhalv10026262m.g Eutrema salsugineum
TPR.G26706 Trifolium pratense
TWI36G1524 Tripterygium wilfordii
TWI59G0284 Tripterygium wilfordii
unitig_0.g632 Utricularia gibba
vmacro01944 Vaccinium macrocarpon
vmacro16306 Vaccinium macrocarpon
VMungo1215G1106 Vigna mungo
VMungo1215G2093 Vigna mungo
Zm00001eb009500 Zea mays

User provided reference genes

Program Settings